Strigops habroptila (Kakapo): 115618994
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Entry
115618994 CDS
T08851
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115618994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115618994
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115618994
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
115618994
NCBI-ProteinID:
XP_030366871
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Position
W:28755684..28804549
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AA seq
856 aa
AA seq
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PGIVGSSVLFSLSQGLEKVIPQPVPAQRTPQELGKSFETSIPDQMEVQILKDEEEVSPEI
IPFDLQEDKLDNCEPEPGSDTGPEEWAGVWVLNWLVQSFKRMVLQLEVLKKPELELKEQK
CKAAVGGTKGTKPQAKPKSSISAAPNTSAAVEPAAAEVQPELVVTLVPWSLAGDGSSLPK
CIGSATSLSGTVINNRLQELVKLFKERTEKVKEKLTDPGVTSDEESPMASSTKLAPAAAP
VPPPGGXSQKGDKVVEEEQYCEMLCCMFRYQPWLDRLRNYQFPSSIDPLTNLMYMLWLFF
VVMAWNWNCWLIPVRRAFPYQTPANIHCWLFMDYLCDLIYLLDILIFQIQLQFIXGGDII
SDKKAMKENYLQSQHFKMDMVGLLPLDFFYFKVGVNPLLRFPHCLKYMAFFKFNKCLEAI
LTKAYMYRVIWTTAYLLYSLHVNSCLYYWASAYEGLGSTTWVYDGERNSYIHCYYWAVKT
LSTIGGLLDPKTLFEIIFQLLNYFTGVFAFSIMIGHMRDVVGAATVEQTYYHSCMDSTIK
HMNFYKIPKTVQNQVKTWYEYTWHSQSMLDESELLVQLLDKMRLDIAIDVNYSIVSKVAL
FQGCDRQMIFDMLKQLRSVVYLPDDYVCKKGEIGHEMYVIQAGQVQMLEGPDGKTVLVAL
KAGSMFGEISLLEAGGGNHQIANVITHGFASLLILDKKDLNEIXVLHYPESQKLLKKKAE
KMVKNNNKPKDEKGAPGDSLITPPKPDTPKLFQAALGAAGRGKGLLAQLPWRLKDLKEMQ
ATQGSSLSPTPPKSPVHQRSPVTSHKTRTHLGEEIFSKSSDSLVTIRVISTAQEDEEIQA
GPGAGVGAVAVGFAKS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
cctggcatcgtggggagcagtgtgctcttctcgctctcccaggggctggagaaggtgatt
ccccagccagtcccagcccaaaggacaccgcaggaacttgggaagagcttcgagacaagc
attcctgatcagatggaggtccagatcctcaaggacgaggaagaggtatctccggagata
atcccctttgatctgcaggaggacaaactagacaactgtgagcctgagcctggctcagat
actggccccgaggagtgggcaggagtgtgggtgctcaactggctggtgcagagcttcaag
aggatggtgctgcagctggaggtgctgaagaagccagagctggagctgaaggagcagaag
tgcaaagcagcggtgggaggcacaaaaggaactaaaccccaggcaaagccaaagagcagc
atttcagctgccccgaacacctcggcagcagtggagccagcagcagccgaggtgcagccg
gagctggtggtcacccttgtcccttggtccctggctggggatggcagcagcctgcccaag
tgcatcggttcagccacgagcctgagtggcactgtcatcaacaaccggctccaggagctg
gtgaagctcttcaaggagaggactgagaaggtgaaggagaagctgaccgaccctggtgtc
acctcagatgaagagagccctatggcatcttccaccaagctggcaccagcagcagcacca
gtgcctcccccgggagggnncagccagaagggggacaaggtggtggaagaggagcagtac
tgtgagatgctgtgctgcatgttcaggtaccagccctggctggaccgcctgagaaactac
cagttccccagcagcattgacccactcaccaatctgatgtacatgctgtggttgttcttt
gttgtcatggcctggaactggaactgctggttgatccctgtccgtcgggctttcccctac
cagacaccagcaaacatccactgctggctgttcatggactacctatgcgacctcatctat
ctgctggacatcctcatctttcagatccagctgcagttcatcncagggggagatataata
agtgataaaaaggccatgaaggagaactacctgcaatcacaacactttaagatggatatg
gtgggcctcctgcccctggattttttctacttcaaagttggtgtcaacccacttttgcgc
tttcctcactgtctgaagtacatggccttcttcaagttcaacaaatgcctggaggctatt
ctgaccaaggcatacatgtacagagtaatttggaccacagcctatttactgtacagcttg
cacgtgaactcctgcctctattactgggcatcagcctatgaaggactgggctctaccacc
tgggtctatgatggggaaagaaacagctacatccactgctactactgggcagtcaagacc
ctcagcaccattgggggcctgctggaccccaagacactgtttgagattatcttccagctg
ctgaactacttcacaggtgtctttgctttctccatcatgatagggcatatgagagatgtg
gtcggtgccgctactgtggagcaaacttattatcacagctgcatggacagtaccattaaa
cacatgaacttctacaaaatccccaaaactgttcagaaccaggtgaaaacatggtacgag
tacacatggcattcgcaaagcatgctagatgagtcagagctgctggtgcagctgctggac
aagatgaggctggacatcgccatcgatgtgaactacagcatcgtgagcaaagtggccctc
ttccagggatgtgacagacagatgatctttgacatgctgaagcagctcagatctgtggtc
tacctgcccgatgactatgtgtgcaagaagggagaaattggccatgagatgtatgttatc
caggcaggacaagtgcagatgctggagggacccgatggcaaaactgtgctggtggctctg
aaagctggatccatgtttggagaaataagcttgctggaggcaggagggggcaatcaccaa
atagcaaatgtcatcactcacggttttgctagccttttaattttggataagaaggacttg
aatgagatttaggtgttgcattatccggagtctcagaagctgctgaagaagaaggccgag
aaaatggtgaaaaacaacaataaacccaaagatgagaaaggagcccctggggactcgctg
atcacccccccaaaacctgacaccccaaagctcttccaggctgctctgggtgctgcaggg
aggggcaaagggctgctggcacagctcccctggaggctgaaggatctgaaggagatgcag
gcaacgcagggttccagtttaagtccaacaccaccaaaatcaccagtgcaccagagatca
cccgtcacctcccacaaaacacgcacccacctgggagaagaaatattctccaaatcttcc
gatagtttagtcactattcgtgtgatttccacagcacaagaagatgaagagatccaagca
ggtcctggggcaggagtaggagccgtagctgtaggcttcgctaagagctga
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