Strigops habroptila (Kakapo): 115619096
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Entry
115619096 CDS
T08851
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2-like isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04145
Phagosome
shab04814
Motor proteins
shab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115619096
09142 Cell motility
04814 Motor proteins
115619096
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115619096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115619096
03036 Chromosome and associated proteins [BR:
shab03036
]
115619096
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115619096
Membrane trafficking [BR:
shab04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
115619096
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115619096
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115619096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
AAA_16
Roc
AAA_29
PduV-EutP
Arf
NACHT
AAA_14
ATPase
NPHP3_N
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-GeneID:
115619096
NCBI-ProteinID:
XP_030366983
UniProt:
A0A672TFN5
LinkDB
All DBs
Position
W:9469332..9495278
Genome browser
AA seq
489 aa
AA seq
DB search
MALVLVEKKLLGLDGFGGAELPSEEEEEGQNLWSSILSEVSTRSRSKLPSGKNILVFGDD
GSGKTTLMTKIQGAEHGKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAV
SAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDKMKIPPEEMRDMEQKFIKEFQE
YVEPEEGYQGSPQRRGPSGQEDEHVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHD
YREEHFDFIQSHIRKFCLQYGAALIYTSVKEEKNIDLLYKYIVHKTYGFQFTTPALVVEK
DAVFIPAGWDNENKIAILHENFMTVKPEDAYEDFIVKPLIRKLVHDKELAAEDEQVFLMK
QQSFLAKQPATPTRPSESPARGPAGSPRTQGRAGSVNVPSASPITSVKKPDPNIKNNAAS
EGVLASFFNSLLSKKTGSPGSPGAGGVQSIAKKSGQKPGLTNVQEELDRMTRRPDSMVTT
NSPPTENEA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtgctggtggagaagaagttgttggggctggatgggtttggcggtgctgag
ctccccagcgaggaggaggaggaggggcagaacctctggtcctcaatactgagcgaagtt
tctacccggtcaagatctaagttgccatcaggcaagaatattcttgtttttggcgatgat
ggctcaggtaaaaccacacttatgaccaaaatacagggagcagagcatggcaagaaagga
agagggctggaatacttgtatctaaatattcatgatgaagacagagatgatcatactcgc
tgtaatgtttggattctagatggagacttatatcataaagggctattgaagtttgcagtt
tctgcagaatccctgcaagacaccattgtagtctttgttgcagatatgtctagaccttgg
actgttatggagtctttacagaaatgggccagtgtcctgcaagaacatattgataagatg
aaaattcctccagaagagatgagagacatggaacagaagtttataaaggagtttcaagag
tatgtagaacctgaagaaggctaccaaggatcaccgcagagaagaggcccttctggccaa
gaagatgaacatgtttctttgccacttggagaaaatgtgctgactcacaaccttggtatt
cctgtgctggtagtttgtacaaaatgcgatgcagtgagtgtactagagaaggagcatgat
tacagagaagaacacttcgacttcattcagtcacacattcgtaaattctgcttacagtat
ggggctgccttgatttatacatcagttaaggaggaaaagaacattgatctgttgtacaag
tacattgtacataaaacatatggttttcagtttaccacacctgccttagtggtagaaaag
gatgcagtttttatacctgctggttgggacaatgaaaataaaattgccattttacatgaa
aattttatgacagtgaaaccagaagatgcatatgaggacttcattgtaaaacctctcata
agaaagttagtccacgataaagagctggcagcagaagatgaacaagtatttcttatgaag
cagcagtcattccttgccaaacagccagcaacgcctacaagaccatcagaatctcctgca
agaggccctgcaggatccccaagaactcaaggcagagctggttccgttaatgtacccagt
gcttcaccaataacatcagttaagaaaccagatccaaatattaaaaataatgctgcaagt
gaaggtgtcttggctagtttctttaacagtctcttgagcaaaaagactggctctcctggg
agtcctggtgctggcggagtgcaaagtatagccaagaaatcaggacaaaaaccaggtttg
acaaatgttcaagaggaattggataggatgactcgcaggccagactctatggtaacaaca
aactctcctccaacagagaacgaagcttga
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