Sediminicurvatus halobius: LMH63_04780
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Entry
LMH63_04780 CDS
T09389
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai00900
Terpenoid backbone biosynthesis
shai01100
Metabolic pathways
shai01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LMH63_04780 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shai01006
]
LMH63_04780 (ispA)
Enzymes [BR:
shai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LMH63_04780 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LMH63_04780 (ispA)
Prenyltransferases [BR:
shai01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LMH63_04780 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UEX78960
LinkDB
All DBs
Position
complement(1034168..1035052)
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AA seq
294 aa
AA seq
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MTLERRLQQSQGRVQAALERLLPAPTLHPARLHEAMRYAVLGDGKRLRPLLVYAGGEALG
VDGPVLNTPACAVELIHAYSLVHDDLPAMDDDDLRRGRPTVHRAYDEPTAILVGDALQTL
AFRTLAHASEPAPARRLQMIDELALAAGSRGMVGGQALDLAAVGRELNAAELEDMHIHKT
GALIRASVRLGALCAPGADATALERLDRYAKCIGLAFQVQDDILDVAGDASVLGKESGAD
ARHHKPTYPALIGLAEARDFARELRDSALAALERFGPEADTLRALAEYVVERDH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgagcgccgcctgcagcagagccagggccgcgttcaggccgcactggagcgt
ctgctgccggccccgaccctgcacccggcgcgcctgcacgaggccatgcgttacgccgtc
ctcggcgatggcaagcggctgcggccgctgctggtgtacgccggtggcgaggccctcggc
gtggacggcccggtgctgaacacgccggcctgcgcggtggagctgattcacgcctactcc
ctggttcacgatgacctcccggccatggacgacgacgacctgcgccgcgggcggcccacg
gtgcaccgcgcctacgacgagcccacggcgattctggtcggcgatgccctgcagacgctg
gccttccgcaccctggcccacgccagcgagccggcaccggcgcggcggctgcagatgatc
gacgagctggcgctggccgccggctcccgcggcatggtgggcggccaggcgctggatctc
gccgccgtgggccgtgagctcaacgccgccgagctcgaagacatgcacatccacaagaca
ggcgcgctcattcgggccagcgtccggctcggggcgctgtgcgcgccgggcgccgacgcc
acggccctggagcgcctggaccgctatgccaagtgcatcggtctcgccttccaggtccag
gacgacatcctggacgtcgccggcgatgccagcgtcctcggcaaggagagcggcgccgac
gcccgccaccacaagcccacctaccccgccctcatcggcctcgccgaggcgcgggatttc
gcccgcgagctccgcgacagcgccctcgccgccctcgagcggttcggcccggaggcggac
acgctgcgggcgctggcggagtacgtcgtggagcgcgatcactga
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