Streptomyces hawaiiensis: CEB94_09975
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Entry
CEB94_09975 CDS
T06917
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shaw
Streptomyces hawaiiensis
Pathway
shaw00040
Pentose and glucuronate interconversions
shaw01100
Metabolic pathways
shaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CEB94_09975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEB94_09975
Enzymes [BR:
shaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CEB94_09975
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QCD55149
UniProt:
A0A6G5RBE7
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Position
complement(2125243..2126553)
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AA seq
436 aa
AA seq
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MHLQKCHDHVMARAGVLVGCTALVLSLSGTGAHAQPRDLARQTLGAGDGWGSHGTGTIGG
SEADAEHVYTVTTWEQFRAALKDGGSAPRIIKVKGVIDAVSEGCDAFAAEGYDFQKYLAA
YDPSAWGHDKPVSGEQEDLRAASAAAQDKTIKASVPADTTIVGVGKGSGIRGGSLQIKGV
DNVIVRNLAFEAPVDCFPQWDPTDDNKTGAWNSEYDGVVVYGSTHVWIDHNTLTDGRYPD
SSLPTYFGKIYQQHDGLVDIVRGANHVTVSWNSFEDHDKTMLIGNSDGAAADDTGKLKVT
LHHNRFEGIVERAPRVRFGQVDAYNNHFVVTKDQPYAYTFGIGASSQLHATDNAFSLPAG
IGVGKTLKKWNESPLTAENNYVNGKRTDLIAVHNAEIPSEILKSGAGWKPVLRTKVDSPK
AVPRIVDRQAGAGRIC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttcagaagtgtcatgatcatgtcatggcgagagccggcgtgctcgtcggctgc
accgcgctcgtgctgtccctgagcggcaccggcgcgcacgcccagccacgggatctcgcc
cggcagaccctcggggccggcgacggctggggctcccacggcaccggtaccatcggcggc
tccgaggccgacgcggagcacgtctacaccgtcaccacctgggagcagttccgggccgcc
ctgaaggacggcgggtcggcgcccaggatcatcaaggtgaaaggggtgatcgacgccgtc
tccgagggctgcgacgccttcgcggccgagggttacgacttccagaagtacctcgccgcc
tatgacccctccgcctggggccacgacaagccggtcagcggtgagcaggaggacctgcgg
gccgcgtccgccgccgcgcaggacaagaccatcaaggcgagcgtgcccgccgacaccacc
atcgtgggcgtggggaagggctccgggatccgcggcggcagcttgcagatcaagggcgtg
gacaacgtcatcgtccgcaacctcgccttcgaggccccggtcgactgcttcccgcagtgg
gacccgaccgacgacaacaagaccggcgcctggaactccgagtacgacggcgtggtggtg
tacggctctacccatgtgtggatcgaccacaacaccctcaccgacgggcgctaccccgac
agcagcctgccgacctacttcggcaagatctaccagcagcacgacggcctcgtcgacatc
gtgcgcggcgccaaccacgtgacggtgtcctggaactccttcgaggaccacgacaagacc
atgctgatcggcaacagcgacggtgccgccgccgacgacacgggcaaactcaaggtcacg
ctgcaccacaaccgcttcgagggcatcgtcgagcgggccccgcgcgtgcggttcgggcag
gtcgacgcgtacaacaaccacttcgtggtgaccaaggaccagccgtacgcctacaccttc
ggcatcggcgcctcctcgcagctccacgccacggacaacgcgttctcgctgcccgccggc
atcggcgtcggcaagaccctgaagaagtggaacgagtcgccgctcaccgccgagaacaac
tacgtcaacggcaagcggaccgacctcatcgccgtgcacaacgcggagatccccagcgag
atcctcaagtccggcgcgggctggaagccggtcctgcgcacgaaggtcgactcgccgaag
gccgttccgcggatcgtcgaccggcaggccggcgcgggccggatctgctga
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