Streptomyces hawaiiensis: CEB94_30430
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Entry
CEB94_30430 CDS
T06917
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shaw
Streptomyces hawaiiensis
Pathway
shaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEB94_30430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shaw03019
]
CEB94_30430
03400 DNA repair and recombination proteins [BR:
shaw03400
]
CEB94_30430
Enzymes [BR:
shaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEB94_30430
Messenger RNA biogenesis [BR:
shaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEB94_30430
DNA repair and recombination proteins [BR:
shaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEB94_30430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
DUF8096
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QCD58678
UniProt:
A0A6G5RKJ5
LinkDB
All DBs
Position
complement(6503527..6505692)
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNTELRAAADAVLTRLVGDVSGEARLREDQWRAIEALVADRRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWDAVQDEIA
AGEVDVLLVSPERLNNPDFRDQVLPRLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPPGVPVLATTATANARVTADVAEQLGTGGTSDALVLRGPLDRDSLSLSVLRLSDAAH
RMAWLAEHLDELPGSGIIYTLTVAAAEEVTAFLRQRGHTVASYTGKTENADRQQAEEDLL
GNKVKALIATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVKHAEVLLLPGKE
DEAIWKYFASLAFPSEDLVRRTLDILAHAEKPLSLPALEPLVELRRSRLETMLKVLDVDG
AVKRVKGGWIATGQPWTYDAERYAWVARQREAEQQAMRAYATTTDCRMEFLQRQLDDEAA
KTCGRCDNCAGPRFAADTSEEALDAARVDLGRAGVEVEPRRMWPTGLPAIGVDLKGRIPA
GEQAASGRALGRLSDIGWGNRLRPLLAPQAPDGPVPDDVAKAVVDVLADWARGPGGWAPG
APEGRPRPAGVVTVASRSRPQLINSLGARIAEIGRLPLLGSVEYTGDAHSGSRSNSAQRL
KALDGALVVPPALASALAEAQGPVLLVDDYTETGWTLAVAARMLRRSGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacacggaactccgggcggcggccgacgccgtcctcacccgtctc
gtcggggacgtctcgggagaggcccggctgcgagaggaccagtggcgggcgatcgaggcg
ctggtcgccgacagacgccgtgccctggtcgtccagcgcacgggctggggcaagtccgcg
gtgtatttcgtggcgacgtcgctgctgcgggcgcggggcagcggtccgaccgtgatcgtg
tccccgctgctcgcgctcatgcgcaaccaggtcgaggcggcggctcgggccggcatccgc
gcccggaccatcaactcctccaacacggaggagtgggatgccgttcaggacgagatcgcc
gcgggtgaggtggacgtcctgctggtgagtcccgaacggctcaacaacccggacttccgg
gaccaggtgctcccccggctctcggccgccaccgggctcctggtggtggacgaagcccac
tgcatctccgactggggccacgacttccggccggactaccgcaggctgcgcaccatgctc
gccgatctcccaccaggagtgccggtgctcgcgaccaccgccacggccaacgcgcgcgtg
acggccgacgtcgcggaacaactcggcaccggcggcacctcggacgccctcgtgctccgg
ggcccgctggaccgggacagcctgagcctgagcgtgctgcggctgtcggacgccgcgcac
cgtatggcctggctcgccgagcacctcgacgaactgccggggtccggaatcatctacacc
ctcaccgtggccgccgccgaggaggtcaccgccttcctccggcagcgggggcacacggtc
gcctcgtacacgggcaagacggagaacgccgatcgtcagcaggccgaggaggatctgctc
gggaacaaggtgaaggcgctgatcgccacctcagcgctcggaatgggcttcgacaagccc
gacctggggttcgtcgtgcacctgggctcgccctcctcccccatcgcctactaccagcag
gtgggccgcgcaggacgaggtgtgaagcatgccgaggtgctcctgctcccgggcaaggag
gacgaggcgatctggaagtacttcgcgtcgctcgccttcccctcggaagacctggtgcgc
cgcacgctcgacatcctcgcgcacgcggagaagcccctgtcgctgcccgccctggagccc
ctggtggagctgcgccgctcccgcttggagaccatgctcaaggttctcgacgtggacggg
gcggtcaagcgcgtcaagggcggctggatcgcgaccgggcagccgtggacgtacgacgcc
gagcggtacgcgtgggtggcacgtcagcgcgaggccgagcagcaggccatgcgcgcgtac
gcgacgacgaccgattgccgtatggagttcctgcagcgccagttggacgacgaggccgcc
aagacgtgcggtcgctgcgacaactgcgccggtccgcgcttcgccgccgacacgtccgag
gaggcgctcgacgccgcgcgtgtggacctgggccgggcaggtgtcgaagtggagccccga
cggatgtggcccaccgggctgccggcgatcggagtggacctcaagggacgcatcccggcc
ggcgaacaggccgcttcgggacgcgcactggggcggctgtcggacatcgggtggggcaac
cggctgcggcccctgctcgcaccccaggcccccgacgggcccgtgcccgacgacgtggcg
aaggcagtggtcgacgtactggccgactgggccaggggtcccggcggctgggccccgggc
gcaccggagggccggccccgcccggcgggcgtcgtcaccgtcgcctcgcgctcgcgaccg
cagctgatcaactccctcggggcgcgcatcgctgagatcggccggctgccgctgctgggc
tcggtcgagtacaccggggacgcgcactcgggctcccggagcaacagcgcccagcggctg
aaggcactcgacggggctctggtcgtgccacccgccctcgcgtccgccctcgccgaggcc
cagggcccggtcctcctcgtggacgactacacggagaccggctggaccctcgcggtcgcg
gctcgcatgctccgacgctccggcgcgcagggggtgttgccgctggtgctggccgtgcag
ggctga
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