Shewanella sp. MR-4: Shewmr4_1900
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Entry
Shewmr4_1900 CDS
T00388
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
she
Shewanella sp. MR-4
Pathway
she03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shewmr4_1900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_1900
Enzymes [BR:
she01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Shewmr4_1900
DNA repair and recombination proteins [BR:
she03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shewmr4_1900
RecFOR pathway proteins
Shewmr4_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
ABI38974
UniProt:
Q0HIZ3
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All DBs
Position
2264734..2265255
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AA seq
173 aa
AA seq
DB search
MAIILGVDPGSRITGYGVIQCQGRQQLYLGSGCIRTSGEDLPLRLKQIFDGISEIIRQYQ
PDEFAIERVFLAKNADSALKLGQARGAAIVAATVANLPVAEYSATQIKNAVVGTGRAKKE
QVQHMIQQLLKLPAAPQADAADALGVAVCHYHTNQSLVALSGRATTRTYGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgattattttaggggttgacccaggttctcggatcacaggttacggcgttatccaa
tgccaagggcggcagcaactttatttgggcagcggctgcattcgcacctcgggtgaggat
ttaccattaagactcaagcaaatctttgatgggatcagtgaaattattcgccaataccaa
cccgatgaatttgcgattgagcgagtgtttctcgccaagaatgccgactcggccttgaaa
ttgggccaagcccgtggtgcggccatcgtggctgcaacagtggccaacttacccgttgcc
gaatacagtgccacccaaattaagaatgcggtggtcggaacggggcgagccaagaaagaa
caggttcaacatatgatccagcaattacttaagctgcccgcggcgccacaggccgacgct
gcggatgcgcttggcgttgcggtatgtcattatcacaccaatcaaagtttggtcgcctta
agcggccgagcgacaacaagaacatatggacggtacagatga
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