KEGG   Shewanella sp. MR-4: Shewmr4_1916
Entry
Shewmr4_1916      CDS       T00388                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class Ia alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
she  Shewanella sp. MR-4
Pathway
she00230  Purine metabolism
she00240  Pyrimidine metabolism
she01100  Metabolic pathways
she01232  Nucleotide metabolism
Module
she_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
she_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:she00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Shewmr4_1916
   00240 Pyrimidine metabolism
    Shewmr4_1916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:she03400]
    Shewmr4_1916
Enzymes [BR:she01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Shewmr4_1916
DNA repair and recombination proteins [BR:she03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Shewmr4_1916
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone DUF6959
Other DBs
NCBI-ProteinID: ABI38990
LinkDB
Position
complement(2282212..2284500)
AA seq 762 aa
MNSNMTVTKRCGARETIDLDKIHRVITWAAKGLKNVSVSEVELRTHLQFFDGIPTEAIHE
TIIKSAADLISPESPDYQFLAARLAVFHLRKKAFGQFEPPKLYDHVTKLVELGKYDMHIL
QDYTREELDIMDTYIDHWRDMNFSYAAVKQLEGKYLVQNRVTHEIYESAQFLYILVAACL
FARYPKETRLQYVKDFYDAVSTFKISLPTPIMAGVRTPTRQFSSCVLIECGDSLDSINAT
ASSIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCLPFYKYFQTAVKSCSQGGVRGG
AATLFYPIWHLEVESLLVLKNNRGVEDNRIRHLDYGVQLNKLMYQRLIKGENISLFSPSD
VPGLYDAFFEDQDEFERLYLQYEQDSSIRKKTLKAVELFSLMMQERASTGRIYIQNVDHC
NTHSPFDSKVAPIRQSNLCLEIALPTKPLNNIDDPNGEIALCTLSALNLGAIKNLAELEP
LADLAVRALDNLLDYQDYPIKAAEISSMNRRTLGIGVINFANYLAKNGMKYSDGSANNLT
HKTFEAIQFYLLKASMNLAKEQGACPLFNETTYAQGILPIDTYKRDLDKICSEPLHLDWE
TLRQDIKQHGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKASKDGQLKQVVPDFD
ELKYNYELLWQMPSNEGYLQLVGIMQKFVDQAISANTNYDPTRFEGRKVPMQTLLKDLLN
AYKLGVKTLYYHNTRDGASDQHDDITNIEKEDDGCAGGACKI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgaatagcaatatgacagtcacaaaacgctgtggtgcacgtgagacaatcgatctcgac
aaaatacaccgcgtaattacttgggcagccaagggattaaaaaacgtttctgtttctgaa
gttgaacttcgcacgcatttacagtttttcgacgggatcccaaccgaagctatccacgaa
acgatcatcaaatctgcggcggatttaatttccccagaatcaccggattatcagtttctg
gctgcgcgcttagccgtattccatttacgtaagaaggcctttggtcagttcgagccgcca
aagttatacgaccatgtgactaaactggtcgagcttggcaagtatgatatgcatattctg
caggattacacccgcgaagaactcgatatcatggatacctatatcgaccattggcgcgat
atgaacttctcctacgcggcggtaaaacagctcgaaggtaagtatctggtacaaaaccgt
gtcacccacgagatctatgagagcgcccagttcctctatattctggtggcggcctgcttg
tttgcccgttatccaaaagaaacgcgcctacaatacgttaaagatttttacgacgcggta
tcgacctttaagatttctctgcccacgccaatcatggcgggtgtacgtacgccaacgcgt
caattcagttcatgtgttctgattgagtgtggcgacagcttagattctatcaacgcgacc
gcctcttctatcgtgaagtatgtcagccaacgcgcgggtatcggtatcaacgccggtcgt
atccgtgcattaggtagcccaatccgcggcggcgaagccttccacactggttgcttacct
ttctacaagtatttccaaacggcggtgaagtcttgctcgcaaggcggcgttcgtggtggt
gcagcgaccctcttctaccccatttggcacttagaagtagaatcgctgctggtactgaaa
aacaaccgcggtgttgaagataaccgtattcgccacttagactacggcgtgcagctcaac
aagctgatgtatcaacgtctgatcaaaggcgaaaacatcagcctgttcagtccatcggac
gtgccaggtctttacgatgccttcttcgaagatcaagacgaattcgaacgtctgtacctg
caatatgagcaagacagcagcattcgtaagaagacattgaaagcagtcgaactgttttca
ttaatgatgcaagagcgtgcttcaacaggccgtatctacatccaaaacgttgaccactgt
aacacccacagtccgttcgactcgaaagtcgctccgatcagacaatctaacctttgtctt
gaaatcgcgttgccgaccaagccactgaacaacattgacgatccgaacggtgaaatcgcg
ctgtgtacactgtcagcgttaaacttaggtgcgatcaaaaacttagccgagcttgagcca
ttagccgatttagcggtacgtgcactggataacctgctggattaccaagattatccaatc
aaagcggctgaaatttcatcgatgaaccgtcgtaccttaggtattggtgttatcaacttc
gctaactacttagcgaagaatggcatgaagtactccgatggtagcgcgaacaacctgact
cacaagacctttgaagcgattcaattctatctgctcaaggcgtcaatgaatctggcaaaa
gagcaaggtgcgtgcccattatttaatgagaccacttacgcccaaggtattttacctatc
gatacctacaaacgtgatttagataaaatttgcagcgagccattgcatttagactgggaa
acactgcgccaagacatcaaacagcacggtttacgtaactcgaccctgtctgcgctgatg
ccgtctgaaacttcatcacagatctcaaacgcgactaacggtatcgaaccgccacgcggt
ttgatcagtgtcaaagccagtaaagatggccagttaaagcaagtggtgcctgattttgat
gagctgaaatacaactacgagctgctatggcaaatgccaagcaacgaaggttacttacag
ctcgtgggtatcatgcagaaattcgttgaccaagcaatttcggccaacactaactatgat
cccacgcgtttcgaaggccgtaaggttccgatgcagactctgctgaaagacttactcaat
gcctataagttaggtgtaaaaacgctgtactaccataacactcgcgatggtgcatcggat
caacacgatgacattaccaacatagagaaagaagatgacggctgtgctggcggcgcctgc
aaaatctaa

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