Shewanella sp. MR-4: Shewmr4_2628
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Entry
Shewmr4_2628 CDS
T00388
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
she
Shewanella sp. MR-4
Pathway
she00540
Lipopolysaccharide biosynthesis
she01100
Metabolic pathways
Module
she_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shewmr4_2628
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
she01005
]
Shewmr4_2628
Enzymes [BR:
she01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
Shewmr4_2628
Lipopolysaccharide biosynthesis proteins [BR:
she01005
]
Lipid A
Shewmr4_2628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
ABI39699
UniProt:
Q0HGW8
LinkDB
All DBs
Position
complement(3132365..3133522)
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AA seq
385 aa
AA seq
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MSKKSQLVFAMVAGELSGDILGAGLMAALQKTHPNARFVGIGGPRMEALGFESLFAMEEL
AVMGIVEVLSRLPRLLHVRSSLIKSITELKPDCFIGIDAPDFNIGLELKLKAQGIKTVHY
VSPSVWAWRPKRIFKIAKATNMVLSLLPFEKAFYDKHQVPCTFVGHTLADDIPLESDKAS
ARQLLELDPDAEYLAILPGSRGGELKQLAEPFVKAALLIKQQFPDIRFVTPLVNQKRREQ
FEQALKAHAPDLEIHMVEGKSREVMAAADGILLASGTATLEAMLIKRPMVVAYRVSPLTY
QIAKTMMQVNRFSLPNLLAGRDVVPELIQHDCTPEKIAAAVGVELNRDFAPIKAEFERLH
QMLRCDASQKAAEAVLALVDAKDVN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaatctcaattagtgtttgcaatggtcgccggagaactctccggcgatatt
ttaggtgcaggtttaatggccgcactgcaaaaaacacaccccaacgcccgttttgtcggt
attggtggacctcgaatggaagccctaggcttcgaatccctgttcgcgatggaggaatta
gccgtgatggggatagtcgaagtgctatcacgcctgccacgcttactccatgtgcgctca
tccctgattaagtccatcaccgaacttaagcccgattgctttatcgggatcgatgcaccg
gattttaatatcggtcttgagcttaagttaaaggcgcaggggattaaaaccgttcactac
gtgagcccttcggtatgggcatggcgtcctaagcgtatttttaaaatcgctaaggccacc
aatatggtgctgtcgttattaccctttgaaaaggccttttacgataagcatcaggtgcct
tgtacctttgtcggccataccttggctgacgatattccgttagagagtgataaggcgagc
gcccgtcagttgcttgagctcgatcctgatgccgaatacctcgcgattttacccggctca
cgcggcggcgaattaaaacaattggccgagcctttcgtgaaggcggcgctgcttatcaag
cagcaatttcccgatattcgctttgtgacgcctttagtgaatcaaaagcgccgtgagcag
tttgagcaggcattaaaagcgcatgcgccggatctggaaatccacatggtggaaggcaaa
tcacgcgaagtgatggctgctgccgatggcattttactggcgtcgggtacggcaacctta
gaagctatgctgatcaagcgtccaatggtggtggcgtatcgagtgagtccgctgacctat
cagattgcgaaaaccatgatgcaagtgaaccgtttctccctgccgaatcttttagcgggg
cgagacgtggtgcccgagcttattcagcatgattgcacgccagagaagattgccgctgcg
gttggcgttgagctgaaccgcgactttgcgccaatcaaagctgagtttgagcgtttgcac
caaatgctgcgctgcgatgccagccaaaaagcggctgaggcggtgttagcactggtcgat
gctaaggatgtgaactaa
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