Shewanella sp. H8: ABIS04_18500
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Entry
ABIS04_18500 CDS
T10623
Symbol
secY
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
sheh Shewanella sp. H8
Pathway
sheh02024
Quorum sensing
sheh03060
Protein export
sheh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ABIS04_18500 (secY)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABIS04_18500 (secY)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABIS04_18500 (secY)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sheh02044
]
ABIS04_18500 (secY)
Secretion system [BR:
sheh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ABIS04_18500 (secY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
XBJ48410
LinkDB
All DBs
Position
complement(4256174..4257514)
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AA seq
446 aa
AA seq
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MAKPGLDLKSAKGGLSELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLADLFAQQKDTIL
GMFNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR
YGTLVLGTLQSVGIATGLPNLMPGLVANPGFGFYFVAVVSLVTGTMFLMWLGEQITERGI
GNGISILIFAGIVAGLPSAIGSTAEQARQGDMNVLVLLLLAVIVFAVTYLVVFVERGQRR
IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWL
SDFALAVSPGQPLYSLLYATAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS
RYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIIVVVIMDFMAQVQTH
MMSHQYESVMKKANLVNKANLDRFGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaggacttgatttaaaaagcgcgaaaggcggtttatcagaattgaaaaca
cgccttctgttcgtgattggtgcgattatcgtctttagagccggttcgtttgtgccaatt
cctggtattgacgcagctgtattggcagatttgtttgcccagcaaaaagataccatcctt
ggcatgtttaacatgttctcgggtggtgccttagagcgtgcttctatcttcgcattaggt
atcatgccgtatatttcggcatcgatcataatgcagttattgactgttgtgcatcctgca
ctcgctgaattgaaaaaggaaggcgaatcaggacgtaagaaaatcagtcaatacactaga
tatggtacactcgtgttggggacgcttcaatctgtcggtattgcaaccggtttaccaaat
cttatgcctggccttgtggccaatccaggatttggtttctacttcgttgcagttgtgagc
ttagtgacaggaactatgttccttatgtggctaggtgaacaaattaccgaacgtggtatt
ggtaatggtatctcgattttgattttcgcaggtattgttgctggtttaccatcggccatc
ggctcaacagccgagcaggcgcgccaaggtgacatgaatgtattagtactactgttgctc
gcagttatcgtatttgctgtaacttatttagtggtatttgtggaacgtggtcaacgtcgt
atagtcgttaactacgctaagcgccaacaaggccgcaaggtttttgcagcgcaaagcacc
catttacctctaaaaattaatatggcaggtgtgattccaccaatttttgcatccagcata
attttgttcccaggcacactggctcagtggtttggtcaaaatgagtctatgtcatggtta
agcgatttcgctttagctgtgtctccaggacaaccgctgtattcattattgtacgcgaca
gcaattatctttttctgtttcttctatactgcgttggtatttaaccctcgcgaaacagca
gacaacttgaaaaagagtggtgcattcattcctgggatccgtcccggagaacagacttcg
cgttacattgataaagtcatgacacgtttaaccttagcgggtgcgttgtacattaccttt
atctgcttaattccggagttcatgttaattgcgtggaaagtacagttctattttggcggt
acttcactacttattatagtagtcgtaatcatggacttcatggctcaggttcagacccat
atgatgtctcatcagtatgagtctgtgatgaagaaagccaatcttgttaacaaagcgaat
ttagatcgttttggtaaataa
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