Shewanella sp. LZH-2: JM642_16040
Help
Entry
JM642_16040 CDS
T10525
Symbol
cobT
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00860
Porphyrin metabolism
shel01100
Metabolic pathways
shel01240
Biosynthesis of cofactors
Module
shel_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JM642_16040 (cobT)
Enzymes [BR:
shel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
JM642_16040 (cobT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Motif
Other DBs
NCBI-ProteinID:
QRK78776
LinkDB
All DBs
Position
complement(3631009..3632061)
Genome browser
AA seq
350 aa
AA seq
DB search
MSQSSLSFQIEPVSKAQDQVIQQKIDLKTKPPGALGQLESLALQIARIQGPQQLQIVKPT
MLVFAGDHGIAAEGVSIAPSEVTHQMVQNFAHGGAAINVFCRQLGFTLEVIDCGILTPVE
GLEGIIDQRLGAGTAAIHLEPAMPLTSVDKGFDMARELIERHHQAGCNLVAFGEMGIGNT
SSAAAIMAAIMQLDVAECVGRGTGINSDTLARKLTLVELALLSHQSALSGPKQVLACLGG
FEIVQMTGAMLAAAERKMLVVVDGFIATAAALVAVTINANVRDYLIFAHCSEEQGHQRML
EYLQAKPLLSLGLRLGEGTGAALALPLIQAAVNFYNQMASFSDAGIEAVV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcaagcctgtcatttcaaatcgagcctgtgagtaaagcgcaggatcaggtt
attcaacaaaaaatcgatcttaagaccaagccgccaggtgccttgggacaactcgaatcc
ttagcattacaaattgctcgcattcaagggccacaacaattgcagatagtcaaaccgacc
atgttggtatttgcaggggatcacggcattgctgctgaaggggtttcgattgccccaagt
gaagtcacccaccaaatggtgcaaaactttgcccacggcggcgcggccattaatgtgttt
tgtcgccaattaggttttacgcttgaagtgatcgattgcggtattttgacacccgttgag
gggctagaagggattatcgatcaacgtcttggcgcgggtactgctgctattcatttggaa
cccgccatgcctttaacgagtgtggataagggctttgatatggcgcgggagcttattgag
cgtcaccatcaagcgggctgtaatctggttgcgtttggtgaaatggggattggcaacacg
tcctctgccgcggcaattatggcggcgattatgcagctagatgtggctgaatgtgtgggg
cgcggtacaggcattaatagcgacactttagcgcgtaagttaaccttggtagagctggcg
ttgctatcgcatcaaagtgcgcttagtgggccaaaacaagtgcttgcttgtcttggcggg
tttgaaattgtgcaaatgacaggtgccatgctggctgctgctgagcgcaagatgttggtg
gttgtggatggttttattgcgacagccgccgcattagtggcggtgacgatcaatgctaat
gtacgggattatctgattttcgcccattgctccgaggagcaaggccatcaacgtatgttg
gaatatttgcaagctaaacccttgttatctttggggcttagattaggtgaaggcacgggt
gcagccttagcattgccgttaattcaagccgcagtaaatttttacaatcaaatggcgagt
tttagtgatgcagggattgaggctgttgtatga
DBGET
integrated database retrieval system
