Shewanella sp. FDAARGOS_354: CEQ32_21685
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Entry
CEQ32_21685 CDS
T04944
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18298
membrane fusion protein, multidrug efflux system
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_21685
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_21685
Transporters [BR:
shf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CEQ32_21685
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
CEQ32_21685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ASF17370
LinkDB
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Position
4833017..4834255
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AA seq
412 aa
AA seq
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MKSNPPLRILMLTAVAAFVLSACGKPAAQQSQAQGAPKVDVAQVLHERVTEWDEFTGRLQ
APESVTLVPRVSGYIASVNFKEGALVKKGDVLFRIDASVFEAEVARLKADLASALSAEQL
ATNDLERARKLFAQKAVSAELLDTRESNKRQTTAAVASVKAALLRAELDLDYTQVRAPID
GRASYANVTAGNYVSAGQSVLTSLVSTASMYAYFDVDEQTYLKYVKLTAEKKRKDPRAGD
NPVYMALANEREYQHIGLVDFVDNSMDRQTGTIRVRATFSNEDNSLLPGLFARLRTAGSG
AYDGILIDDKAVGTDLNNKFVLVVANDGTVEYRGVTLGEKVQGLRIVKQGLAADDKIVVN
GMQRVRPKMQIEPHLVDMADSEQLEALRQAQLLLDKHQENITTPDVEVASRG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaacccacctttacggatattgatgttgactgccgtggcggcgtttgtcctt
tcggcctgtggtaaaccagctgcacagcaaagccaagctcaaggtgcacctaaggtcgat
gttgcgcaggtattgcatgagcgcgttaccgagtgggatgaatttaccggccgtttgcag
gcgccagaaagtgtgaccttagtgccacgcgtgtctggctatatcgcgtcggtaaacttt
aaagaaggcgccttagtgaaaaaaggcgatgtgctatttcgtatcgatgcaagtgtgttt
gaagcggaagtggcccggttaaaagcagatcttgctagcgcgctctctgctgagcaactg
gccactaacgacttagaacgtgcccgcaaactctttgcccaaaaggcagtatcggcagaa
ttactcgatacccgcgagtctaacaaacgccaaaccacggcggccgtggcctctgtgaaa
gcggcgctgctacgcgccgagctggacttagattatacccaagtgcgcgcaccgattgat
ggccgtgcctcctacgccaatgtcaccgccggtaactatgtgtctgcggggcagagtgta
ttaactagcttagtgtcgaccgccagcatgtatgcctacttcgatgtggatgagcaaacc
tacctgaaatacgtcaagttaaccgccgagaaaaagcgtaaagaccctcgtgcaggcgat
aatcccgtgtatatggcgctggctaacgaacgcgaatatcaacacataggtctagtggac
tttgtcgataactctatggacagacagacgggcactattcgagtacgtgccacgtttagc
aatgaggacaacagcctgctccctggtttgttcgccagattacgtaccgccggtagcggc
gcctatgacggtatcttaatcgatgataaagccgtgggcacggatctgaacaataagttc
gttttagtagtggcaaacgatggcaccgtggagtatcgcggtgtcaccctaggtgaaaaa
gttcaaggtttacgcattgttaagcaaggtttagcggcagacgacaaaatcgtcgtcaat
ggcatgcaaagggttcgtcctaagatgcaaattgagccacacctggtcgatatggccgac
agcgaacagctagaggcgcttcgtcaagctcaattactgcttgataaacatcaagaaaat
atcaccaccccagacgttgaagtagcgagccgcggttaa
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