Staphylococcus haemolyticus Sh29/312/L2: ShL2_01343
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Entry
ShL2_01343 CDS
T03837
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shh
Staphylococcus haemolyticus Sh29/312/L2
Pathway
shh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ShL2_01343 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shh03400
]
ShL2_01343 (nth)
Enzymes [BR:
shh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ShL2_01343 (nth)
DNA repair and recombination proteins [BR:
shh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ShL2_01343 (nth)
Prokaryotic type
ShL2_01343 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
iSTAND
RLAN
CrtO
Motif
Other DBs
NCBI-ProteinID:
AKC76206
UniProt:
A0A2A1K4T9
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All DBs
Position
1411876..1412535
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AA seq
219 aa
AA seq
DB search
MISKKKALEMIDVIADMFPNAECELKHDNAFELTIAVLLSAQCTDNLVNKVTRTLFQKYK
TPQDYLNVDIEELQNDIRSIGLYRNKAKNIQKLCQSLLEQFNGQIPSTHKELESLAGVGR
KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVTQVEDRLCSIIPKERWSRSHHQ
LIFFGRYHCLARKPKCDICPLLDDCREGQKRMKGQLKEA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgataagtaagaagaaagcactagaaatgatagatgtcatagctgatatgtttccaaat
gcagaatgcgagctcaaacatgataatgctttcgaattaacaattgcagtccttttatca
gctcaatgtaccgataatttagtaaataaagttacacgtacgctttttcaaaagtataaa
acgcctcaagactatttaaatgtggatatcgaagaactgcaaaatgatatacgttcgatt
ggcttatatcgtaacaaagcgaaaaatatacaaaagctatgtcagtcactactcgaacaa
ttcaatggtcaaattccgagtactcataaagaattagaaagtttagctggagtcggtcgt
aaaacagcaaatgttgttatgagtgtagctttcgatgagccatcattagcagttgatacg
catgttgaacgtgtttctaagcgactaggaattaatagatggaaagataatgtaacacaa
gtagaggatagattatgtagtatcattccaaaggaaagatggagtagaagtcatcatcaa
cttatcttctttggtcgctaccattgtttagctagaaagcctaagtgtgacatatgtccc
ttactagatgattgtagagaagggcaaaaacgtatgaaaggacaattaaaggaagcttga
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