Salvia hispanica (chia): 125187779
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Entry
125187779 CDS
T09851
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
shis
Salvia hispanica (chia)
Pathway
shis04145
Phagosome
shis04517
IgSF CAM signaling
shis04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125187779
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125187779
09142 Cell motility
04814 Motor proteins
125187779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125187779
03036 Chromosome and associated proteins [BR:
shis03036
]
125187779
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shis04812
]
125187779
04147 Exosome [BR:
shis04147
]
125187779
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125187779
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125187779
Cytoskeleton proteins [BR:
shis04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125187779
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125187779
Exosomal proteins of other body fluids (saliva and urine)
125187779
Exosomal proteins of colorectal cancer cells
125187779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
125187779
NCBI-ProteinID:
XP_047940369
LinkDB
All DBs
Position
5:complement(26932338..26934491)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRKSLDIGRPTYHNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPSS
MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGDDDENEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatttcgatccacattggtcaggccggtattcaggtcgggaacgcctgc
tgggagctctactgccttgagcacgggattcagcctgatgggcaaatgcccggtgatacc
accgtcggtggtggtgatgatgcctttaacacctttttcagcgagactggcgctgggaaa
catgtgcctcgtgctgtgtttgtggatctggagcctactgtgattgatgaggtgcgcact
ggcacataccgtcagctgttccacccagagcaacttatcagtggcaaggaagatgctgcc
aacaactttgccagaggtcattacaccattggcaaagaaattgttgatctctgccttgat
aggatccgcaagcttgcagataactgcactgggcttcagggtttcttggttttccatgct
gttggtgggggtactggatccgggcttggatctcttctgcttgagaggctctctgttgac
tatggtaaaaagtcgaagttgggtttcaccatttatccttcccctcaggtttcgactgct
gttgttgagccctacaactccgtgctctccacccattctctccttgagcatactgatgtt
gctgtgcttcttgacaatgaagctatctatgatatctgccgcaaatcacttgatattggt
aggcccacttaccataatctcaacaggctcatttctcaggtaatttcctccttgacagca
tctctgaggtttgatggagcattgaacgtggatgtgaacgaattccagaccaacttggtt
ccatacccaaggatccacttcatgctttcgtcgtatgcccctgtgatctctgctgagaaa
gcttaccatgagcagctctctgttgctgaaatcaccaacactgcattcgagccctcatcc
atgatggtgaagtgtgatcctcgccatgggaagtacatggcctgctgtctgatgtacagg
ggtgatgtcgtccccaaggacgtgaatgcagctgttgccacaatcaagaccaagaggacc
atccagtttgttgactggtgtccgactggtttcaaatgtggtatcaactaccagccacca
actgttgtccccggtggagatctggccaaggtgcagagggcggtgtgcatgatttccaac
tcaactagcgttgctgaggtcttctcgaggattgatcacaagtttgacctgatgtatgcc
aagcgtgctttcgtgcactggtatgttggtgagggtatggaagaaggcgagttctctgag
gctagggaggatcttgctgctcttgagaaggactacgaggaagttggggcggaatctgct
gaaggagatgacgatgagaacgaggaatactga
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