Salvia hispanica (chia): 125190693
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Entry
125190693 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: NPL4-like protein 1
KO
K14015
nuclear protein localization protein 4
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125190693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125190693
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125190693
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
125190693
NCBI-ProteinID:
XP_047944017
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Position
5:complement(32036286..32039509)
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AA seq
411 aa
AA seq
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MMIRIRSRDGLERVSIDNPPATVAALKSAIESQLQVPVHAQILSTNQNLLLAKSQTDLTR
FTDMINPNTGLAALNIGHGSIVYLAYEGERTVAGPAFHPSGSFGKKMTMDDLIAKQMRIT
HQESPHCDLVSFDRDAANAFQRYVNESLAFAVKRGGFMYGTVLEEGKVEVDFVYEPPQQG
TEENLILLRDPXEEKMVEAIASGLGMRRVGFIFMQTVSQDKKDYTMSNLEVLQAVELQAE
GDLKEWVTAVVKLEVDEDGGAAVHFEAFQMSDVCVRLFKEGWFERDVQEEIDPKLSRMKK
DVVVGGKDTKDVDNDFFMVVVKIADHQAPLSSTFPIENRNTPVTMRALKNHLDRAKNLSF
VIQISDFHLLLLLARFLDVNSDVPALAGCVQLQAMVPEGYQLLIESLAAAS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagaatccggagccgagacggtcttgagcgcgtctcaatcgacaaccctccc
gccaccgtcgccgcgctcaagtccgccatcgaatcccagctccaggtgcccgtgcatgcc
cagattctctccaccaatcaaaatttgcttcttgcgaaatcccaaaccgatctcacccgg
ttcacggacatgatcaaccccaacaccgggctggccgccctcaacatcggccacggctcc
attgtgtacctcgcctacgagggcgaacgcacggtggcggggccggccttccacccgtcc
gggtcgtttgggaagaagatgacgatggacgacctgattgcgaagcagatgaggatcacg
caccaggagagccctcattgcgacctcgtctcgtttgatcgcgacgccgcgaacgcgttc
cagcgatacgtgaacgaaagcttggcttttgcggtgaagcgcggcggttttatgtacggg
acggtgttggaggaggggaaggtggaggttgatttcgtctacgagccgccacagcagggg
acggaggagaatttgatccttttgagggatcctngagaggagaagatggttgaggccatt
gcttcggggctggggatgaggagggtcgggtttattttcatgcagacggttagccaagat
aagaaggactacacgatgtcgaatctggaggtgttgcaggcggtggagcttcaggcggag
ggggatttgaaggagtgggtgactgctgttgtgaaactggaggtggatgaggatggggga
gctgctgtgcattttgaggcttttcaaatgagtgatgtatgtgtaaggttgtttaaagag
ggctggttcgagcgggatgtgcaagaggagattgatcctaagttgtcgaggatgaagaag
gatgtggttgttggagggaaagacactaaggatgtggataatgacttcttcatggtggtt
gtcaagattgctgatcatcaggctccactttcttcgacatttcctattgagaacaggaac
acccccgtgacaatgagggcgttgaaaaatcatctggatcgagcaaagaatctttccttt
gtgatacagatttcagactttcatctgctactgttgctggcgaggtttctagacgtgaac
tccgatgtcccagcattggcagggtgtgtacagttacaggccatggtgcctgaaggatac
cagctattgatcgagtcgttggctgctgcttcttag
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