KEGG   Salvia hispanica (chia): 125201221
Entry
125201221         CDS       T09851                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125201221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125201221
Spliceosome [BR:shis03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125201221
 Complex B
    125201221
 Complex C
   U2 SnRNP specific factors
    125201221
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RRM_7 DUF5881 DUF1177
Other DBs
NCBI-GeneID: 125201221
NCBI-ProteinID: XP_047955203
LinkDB
Position
1:complement(46394737..46396549)
AA seq 126 aa
MAAAISLRKGNTRLPPEVNRVLYIRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGT
AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMGKKFDQKKKEEEIQKLQEKYGI
STPKDK
NT seq 381 nt   +upstreamnt  +downstreamnt
atggcagcagcaatcagcctccgcaaagggaacacccggctcccgccggaggtgaaccgc
gtgctctacattcggaaccttccgttcaacatcacgagcgaggagatgtacgacatcttt
ggcaagtacggggcgatacggcagatccgcatcggcaccaacaaggacactcgcggcacc
gccttcgtggtctacgaggatatctatgacgccaagactgctgtggaccacctctctggc
ttcaacgtggcgaaccggtacctgatcgtcctctattaccagcaggcgaagatggggaag
aagtttgaccagaagaagaaggaggaagaaatccagaagctccaggagaagtacggcatc
tccacgcccaaagataagtag

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