Salvia hispanica (chia): 125205276
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Entry
125205276 CDS
T09851
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125205276
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125205276
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125205276
NCBI-ProteinID:
XP_047960070
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All DBs
Position
2:18757984..18760380
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AA seq
442 aa
AA seq
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MASIYSIKMSILLLSLLYLVALLPKSNAKIAEMDDYLRKKAEQSHLEYIKAYVPNPEAVA
EEISQEVGETMVHHITKRRHLLEGGNKATNPIDRCWRGDRNWDQNRKRLVDCVLGFGRHT
TGGRDGEFYVVTDNSDDDVDNPRPGTLRHAVIQTEPLWIIFERDMLISLKQELIFASDKT
IDGRGAKVRIAYGAGFTIQFVHNVIIHNIRMHNIVPAFGGLIRDAVDHIGLRTISDGDAI
SIYGSNNIWIDHVSLSKATDGLIDAIEGSTAITISNCKFNNHNAVMLLGAHDSTTEDKLM
QTTIAFNRFGEGLVQRMPRCRWGLFHIINNYYSHWQMYAIGGSANPTIISQGNRYKAADN
SNTKQVTKREYSSEEEWQNWQWQSEGDVFVNGAYFQSSGPKIKHNHWSVATKRHMMKFRP
GSYAGRLSRYAGVLKCVAGKLC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatttatagcatcaagatgtcaattctcctcctctccctgttatatttagtt
gcactgctgcctaaatccaacgcaaaaattgcagaaatggatgattatctcagaaaaaag
gctgagcaatcccatcttgaatatatcaaggcctatgttcccaaccctgaggctgttgct
gaggaaatcagtcaagaagttggcgagacaatggtgcaccatatcaccaagaggaggcac
ctcctggaaggtggcaacaaggctacaaaccccatcgaccgttgctggcgcggcgaccgc
aactgggaccagaaccgcaagaggctcgtggactgcgtcctcggcttcggccgccacacc
acaggaggaagggacggggaattctacgtcgtcaccgacaactccgacgatgacgtggat
aaccctaggccgggcaccctccggcacgcggtcatccagacggagcccctgtggatcatc
ttcgaacgcgacatgctcatcagcctcaagcaagagctcatcttcgccagcgacaagacc
atcgacggccgtggcgccaaagtccgcatcgcgtacggggccggcttcacgatccagttc
gtccacaacgtgatcatccacaacatccggatgcacaacatcgtcccggccttcggaggc
ctgatcagggacgctgtcgaccacatcggcctccgcaccataagcgacggcgacgccatc
tccatctacggctccaacaacatctggatcgaccatgtctccctctccaaagccaccgac
ggcctcatcgacgccatcgagggatccaccgccatcaccatctccaactgtaaattcaac
aaccacaatgctgtgatgcttcttggagcacatgatagtactactgaagacaaactgatg
caaacaacaattgcattcaaccgttttggtgaaggtttggtgcagagaatgccgaggtgc
agatggggtctattccacatcatcaacaactactattcccactggcaaatgtatgccatc
ggcggcagcgcaaaccccactattatcagccagggcaatcgatacaaggctgcagacaac
tccaacaccaagcaggtgaccaagagggagtattcttctgaggaggagtggcagaattgg
caatggcaatccgaaggcgatgtgtttgtcaacggagcctacttccaatcttctggtccg
aagatcaaacacaaccactggagtgttgccacaaagaggcacatgatgaagttcaggcca
ggctcatatgcaggcaggctatcgcgatatgcaggcgtcctcaagtgcgttgcagggaaa
ctgtgctga
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