Salvia hispanica (chia): 125212156
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Entry
125212156 CDS
T09851
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125212156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125212156
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125212156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125212156
NCBI-ProteinID:
XP_047968195
LinkDB
All DBs
Position
3:complement(44878645..44882089)
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AA seq
407 aa
AA seq
DB search
MSCPSDQRCYICWKFSCQYGTRCKFLHTTPQQSQSNPFGSSRSPNPQPNPFGFGAQTSRT
PNQQPNPQPNPFGFGVQSNAHSRGGDGFVSKPNQVKPFDNKWSRFSNVNNSSAPASRQAN
NQPSTANHTCNPTDIESCKRAILEDLENEKPLWKLTCYGHMRNGSCDIVGDISYDELRAL
AYDDAKHGKDIASIVERERNLLNSKLLEFQKLAQNPYPVSSAPTPSSQNMFGGGSTIAPV
VNNGFSSQVSSFSQLSGSSNTRSAAAPNFSFGQPNAFQNNTQPSSFQTNNSPFNTSGSFG
IQPQHSTQSFSPFGTTNSNNGAISAQQNPFSTPASLPQTGNGAGKQLNFFTNEPISASSG
IGLTNTTTQLINNIPTENTNVDAGIWTKVEWNVGEIPEEEPPTIYIN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccctagcgatcagagatgttacatttgttggaagttcagctgtcagtatggc
acccgttgtaagtttcttcacaccacgccacagcaaagtcagagcaatccttttggatct
agtcgttctccaaatccacagccaaacccttttggttttggtgctcaaactagtcgtact
ccaaatcagcaaccaaatccgcagccaaacccttttggttttggtgttcagagcaatgca
cactcaagagggggtgatggctttgtatccaaaccaaatcaagtcaagccatttgataat
aagtggagtcgtttttccaacgtaaacaatagcagtgctcctgcttcgaggcaagctaat
aatcagccttcaactgctaatcatacgtgcaaccccactgatatcgagtcctgcaaacgg
gcgatactggaagatctcgaaaatgagaaacccctatggaaacttacctgttatggtcac
atgcgaaatggttcctgtgacattgtcggtgacatcagctatgatgagttgcgtgcatta
gcatatgatgatgccaaacatggaaaagacatagcgtccattgttgagagagagaggaat
ttgctcaactccaagttacttgagtttcagaaacttgcacaaaatccttacccagtgtct
tcagctcctactccgagttctcaaaatatgtttggtggaggcagtacaattgctccagtc
gtgaacaatggtttttcttctcaggtgtcaagctttagtcaattgagtggatcatcaaac
acaaggtctgcagctgcacctaattttagctttggtcaaccaaacgcattccagaacaat
actcagccgtctagttttcaaacaaacaattcacctttcaacacttcaggctcttttggt
atccaacctcaacattctacccaaagcttctctccttttggtactacaaactccaacaat
ggtgcaataagtgctcagcagaatccgttttcaactccagccagcttaccacagacagga
aatggggcgggtaaacagttaaattttttcaccaatgaaccaatttcagcttccagtggc
attggattgaccaacaccaccacccagttgatcaacaacattccaacagaaaacactaat
gtggatgctggcatttggacaaaagttgaatggaatgtcggcgagatcccagaagaagag
cctccgacgatctacattaactag
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