Salvia hispanica (chia): 125213654
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Entry
125213654 CDS
T09851
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125213654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125213654
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125213654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_6
PAS_9
NANM
F-box-like
F-box
PAS_3
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
125213654
NCBI-ProteinID:
XP_047970268
LinkDB
All DBs
Position
3:complement(46342342..46345126)
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AA seq
626 aa
AA seq
DB search
MRMEDSEEEEERDRMFRKRLKCGDDPDYMEQDAGPDLFPYAAADRLFYSPELAPTSIVVS
DVMEPDFPVIYVNRVFEFSTGFRADEVLGRNCRFLQFRDPRAKRRHPLVDPVAVAEMRRC
LEEGIEFHGELLNFRKDGTPLINSLRLMPIHSDDGVVTHVIGIQLFTEAKLDLNNVSYPV
FKETYQQQSDKLVEPFQVGTGMLRSHQQKQQEVCVLLQLSDEVIAQNILSRLTPRDVASI
GSVCRRIRQLTKNEHVRKMVCQNAWGVDVTGALELMTKKLGWGRLARELTTLEAISWKKF
TVGGGVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDARHPEWRRVSVKSSPP
GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVAGGTPPLPRSWHSSC
TLEGSKLVVSGGCTDAGVLLSDTFLLDLNMEKPTWKEIPTSWTPSSRLGHSLSVYGRTKI
LMFGGLAKTGHLQLRSGSAYTIDLEKEKPEWRQLECGTDVGGQNAVVPPPRLDHVAVTMP
CGRIIVFGGSIAGLHSPSQLFLLDPSEEKPSWRTLNVPGKPPKFAWGHSTCVVGGTRVLV
LGGHNGEEWVLNELHELCLATRQDSP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggaagatagcgaagaagaggaggaacgcgaccgcatgtttcggaagaggctc
aagtgcggcgacgaccccgattatatggagcaggacgccggaccggatttatttccgtat
gcggctgctgaccgcctgttctactcgccggagctggcgccgacgtcgatcgttgtgtcg
gatgtgatggagccggacttcccggtcatatatgtcaacagagtcttcgagttctccact
ggattccgcgccgatgaagtccttggtcgcaactgccgcttcctgcaatttagagatcca
cgtgccaagcgacggcaccctttggttgatccagtggctgtggcggagatgagaagatgt
cttgaggaaggtatcgaatttcacggagagctacttaacttcaggaaagatggtactcct
ttaatcaacagcctaagactcatgccaattcacagcgatgatggtgtggtcacacatgtt
ataggaattcagctatttactgaagccaagctagacttaaataatgtatcgtatcctgtg
ttcaaagaaacatatcagcaacaaagcgacaagttagtcgaaccctttcaagtgggaacg
ggtatgcttcgcagccatcaacaaaaacaacaagaagtatgtgtgcttctgcagctgtct
gatgaagttatagctcaaaatattctgtcacgcttgacaccaagagatgttgcttcaatt
gggtctgtctgcagaaggatccggcagttaaccaagaatgaacatgtaaggaaaatggta
tgtcaaaatgcatggggagtggatgtcacgggcgcactggagttgatgacgaagaagtta
ggatggggacgtttggccagggaacttacgactctagaagcaatttcttggaagaagttc
accgtgggaggtggagtagagccttctcgctgcaattttagtgcatgtgctgtcggaaat
aggttggttttgtttgggggggagggagtaaacatgcagccaatggatgatacatttgtt
ctgaaccttgatgccagacatcccgaatggcgtagggtgagtgttaagtcttctcctcca
gggcgttggggccatacactctcaagcctgaatggttcgtggttggtagtttttggtggt
tgcggaagacaaggattactgaatgatgtatttgttctcgacttggacgctaagcagcca
acatggaaagaagtcgcaggcggaactcctccactgcctagatcttggcatagttcttgt
acactagagggttctaaattggtcgtctcaggtggatgcacagatgcaggagtacttctg
agcgacacgtttctgttggatctaaacatggagaagccaacatggaaggagatcccaact
tcctggaccccatcatccagattaggccactcactatcggtttatggacggacaaaaata
ttgatgtttggtggcctagcaaagacggggcacttacagttgcggtcagggagtgcatac
accatcgatctggagaaggagaagccagagtggaggcagcttgaatgtgggacagatgtt
ggaggacagaatgctgtggttccacctccgagacttgatcacgttgctgtaacgatgccc
tgtggacggatcatagtatttggcgggtcgatagcgggccttcattctccatctcagctg
tttttgttggatccatccgaagaaaagccgtcgtggaggacgctaaacgtgcctgggaag
ccaccgaagttcgcttgggggcacagcacgtgcgttgttgggggaaccagagttttggtc
cttggaggtcacaatggtgaggaatgggttctgaatgaattgcatgaattgtgcttagct
acaaggcaggattctccatga
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