Salvia hispanica (chia): 125219197
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Entry
125219197 CDS
T09851
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125219197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125219197
03012 Translation factors [BR:
shis03012
]
125219197
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125219197
Translation factors [BR:
shis03012
]
Eukaryotic type
Release factors
125219197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
125219197
NCBI-ProteinID:
XP_047977062
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All DBs
Position
4:34706326..34710068
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AA seq
436 aa
AA seq
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MAEGQENDKNIEIWKIKKLIKALEAAKGNGTSMISLIIPPGDQIARVTKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIITDDGKEKKVTFDFAPFKAIN
ASLYLCDNKFHTEPLSQLLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVETLIVWENLDINRYTLKNSVTNEIVIKYLNKEQERDQSNFKD
AETSGELEVQDKMPLLEWFANEYRNFGCSLEFVTNRSQEGSQFCRGFGGIGGVLRYQLDI
RSFDEPSDEGEFYESD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggccaggaaaatgataagaatattgaaatatggaaaataaagaaattgatc
aaggctctagaagctgctaaaggaaatggtaccagcatgatatcccttataattcctcca
ggtgatcaaatagcccgggtcaccaaaatgctggcagaagagtatggaacagcatctaat
attaaaagcagggtgaatcgtcaatcagtgctaggtgcaatcacctctgcgcagcagagg
ctaaagttgtatagcaaggtcccaccgaatggcctcgtgctctatactggtactataatc
acagatgatggaaaagagaaaaaggtcacgttcgactttgcaccttttaaggccataaat
gcttctctttacctttgtgacaataaatttcatacagagcctttgagtcaactcttggaa
tctgatgaaaagtttgggtttatcgtcatggatggtaatgggaccctttttggaacctta
agtggtaatacaagagaagtgcttcacaaattctctgttgatcttccaaagaaacatgga
agaggaggacaatcagctcttcgatttgcccgtcttcgaatggagaagcgtcacaactat
gtgaggaaaactgcagagcttgccactcaattcttcattaatcctgctaccagtcagccg
aatgtgtcagggttgatacttgctgggtcagctgatttcaagactgagctgagtcaatct
gatatgtttgatcctcgcctccaagccaagatactaaatgtggtagatgtctcctatggt
ggggaaaatggtttcaatcaggccattgaactatctgctgagattttgtccaatgtaaag
ttcatacaagagaaacgcttgatagggaaattctttgaagaaatcagtcaagatactggg
aaatatgtatttggtgtggatgatacgataaaagctttggagatgggagctgttgaaaca
ttgatagtgtgggaaaacttggatataaatcgttatacactaaaaaacagtgtgaccaat
gagattgtcatcaaatacttaaacaaggagcaagagcgtgaccagagcaacttcaaggat
gctgaaacatccggagaattggaggttcaagacaaaatgccactactggagtggtttgca
aatgaatatagaaactttggttgttcacttgaatttgtgacaaatcgatcccaggaagga
tcacagttctgccgaggatttggtggtattggtggagttcttcgttaccagcttgacatt
cgatcttttgatgagccatccgatgaaggagagttttatgagtcggactaa
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