Salvia hispanica (chia): 125219216
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Entry
125219216 CDS
T09851
Name
(RefSeq) importin subunit beta-1-like
KO
K14293
importin subunit beta-1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125219216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125219216
03036 Chromosome and associated proteins [BR:
shis03036
]
125219216
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125219216
Pre-60S particles
125219216
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125219216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
HEAT_2
HEAT_MROH2B_C
PDS5
Vac14_Fab1_bd
HEAT_GCN1_C
UTP20_N
TPR_DNAAF5
DUF577
Cnd3
Urocanase
MMS19_N
Motif
Other DBs
NCBI-GeneID:
125219216
NCBI-ProteinID:
XP_047977085
LinkDB
All DBs
Position
4:complement(52018262..52022154)
Genome browser
AA seq
874 aa
AA seq
DB search
MSFDITQYLLAAQSPDAKVRKDAEAILCKFREENLPQYLLSLSVELSNEGKPIESRRLAG
IVLKNDLGAKDSSTKEQPVQLWVQIDISFRAQIKNSLLSTLGSTFREASHTAAQVVAEVA
SIEIPRKEWPELVGSLLANMTRQDGSPSLRQATLETLGYVCEVISDENLVQDEVNAILTA
VVQGMNTTEPNPEVRLAATKALYNALEFARTNFNNEMERNYIMKVICDAALAKEAEIRQA
AFECLVSIASTYYEVLEPYMQRIFELTSNAVKGDEEAIALQAVEFWSSICDEEMELQDYE
VPEIGDSSVEHSRFIEKALQTLVPLLLETLLKQDEDQDQEDGTWNLAMAGGTCLGLVAKT
VGDAVVTLVMPFVEANISKPDWRSREAATYAFGSILEGPSIEKLSPMVNAGLDFLLNSMN
DENSHVKDTTAWTLGRIFELLHSPATGFSVITPANLQKILAVLLASLKDAPHVSEKVCGA
LYFLAQGYEDAGPSSSMLTPFLPDILSSLIATAERTDGSDSKLRSSAYETLNEVVRCSNL
SETSEIIVKLLPAIMTKLEQTLRLQIVSSDDREQQGDLQASLCGVLQVIIQTLSSAEETK
PIIMQAADQIMLLFLSVFACRSTTVHEEAMLAIGALAYATGPRFEVYMKEFYKYLEMGLQ
NFEEHQVCAISVGVVGDICRALDDKILPYCDGIMTHLLKDLSSAELNRSVKPPIFSCFGD
IALAIGEHFEKYINFALPMMQSASEVCAQMDYNDEEMIDYGNQLRRSIFEAYSGILQGFK
NAKAELMLPHAPHLLQFIELVAQDEQRDTNVTKAAVAVQGDLADALGSNIKMLFKDTKFC
SNLLSECLETDDEQLKSTAIWAQEMIRRAFSDSS
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatattacccagtatctcttggctgcacaatcaccagatgccaaagtgcgg
aaggatgcagaggctatactctgtaagtttcgggaggaaaacttgccacaatatctattg
tcattgtccgttgagctctctaatgagggaaagcctatcgagtctcgtagacttgctggt
attgtccttaagaacgacttgggtgctaaagattcttcaacaaaggaacagcctgtgcaa
ctatgggttcagattgatatttcttttagagcccagataaagaactctctcttgagcacc
ctcgggtccacttttcgtgaggccagtcatactgctgcgcaggttgttgctgaggtggct
tcaattgaaataccccgaaaggagtggcccgaacttgttggttcactacttgccaacatg
actagacaagatggatccccatctttgagacaagctactctcgaaacacttggttatgta
tgtgaggttatttctgatgaaaatcttgtgcaagatgaagtgaatgctattctgacagcc
gttgttcaaggaatgaatacaactgagccgaaccctgaagttcgactggctgccactaaa
gctctgtataatgcccttgaatttgctcgcacaaattttaacaatgaaatggagaggaac
tatataatgaaggttatctgtgatgctgccttggctaaagaggcagagatccgacaggct
gcttttgagtgtcttgtttccattgcgtctacatactacgaggtgcttgaaccttacatg
caaaggatctttgagcttacatctaatgcagtcaaaggagatgaggaggccattgccctt
caagcagttgagttttggagctctatttgtgatgaagaaatggagcttcaagactatgag
gtccctgaaattggggattcaagtgtggagcactcacgctttattgaaaaggctcttcag
actttagttcctctgctgcttgaaaccctacttaagcaggatgaggaccaagatcaggaa
gatggaacttggaatctagctatggctggtggcacatgtcttggtcttgttgctaagact
gttggggatgctgttgttactctggtgatgcctttcgtagaggccaacatatccaagcct
gattggcggtcccgtgaggcagctacatatgcatttggctcaatccttgaagggccaagc
attgagaagctatctccaatggttaatgctggtttggattttctgctcaattcaatgaat
gatgagaatagccatgtaaaagataccactgcatggacccttggtcgtatctttgaattg
ctacattcaccagctactggtttctctgtcattactccggcaaacctccagaagattttg
gcagtcttattggctagtttaaaagatgctcctcatgtctcagaaaaggtttgtggagct
ctctatttccttgctcagggatacgaggatgcagggccaagctcttcaatgctcacacct
ttccttccagatatcttgagcagtttaattgccactgctgagcgaacagatggcagtgac
tctaaactcagatcttctgcttatgaaaccttgaatgaggttgttcggtgttcaaacctt
tcagagacatctgagataattgtcaaacttctccctgctatcatgacaaagttggaacaa
actttacgtcttcagattgtgtcatctgatgacagagaacagcaaggagatttacaagcc
tctctttgtggtgttcttcaggttattattcaaacactaagcagtgctgaggagactaag
cctataattatgcaggcagctgaccagatcatgttacttttcctaagtgtttttgcttgt
cgtagtactactgtgcatgaagaagcaatgttggctattggtgctcttgcctatgccact
ggaccacgttttgaagtgtatatgaaagaattctacaagtacctagagatgggtttacaa
aattttgaggagcatcaggtgtgtgctatttcagttggggtggttggtgacatttgtcgt
gctttggatgacaagatcttaccatattgtgatgggatcatgacacacctcctcaaggat
ttgtctagcgctgaactcaaccgttcggttaaacctcccatattctcctgctttggtgac
attgctcttgcaattggtgaacactttgagaagtatatcaattttgctttgcccatgatg
caaagtgcatcagaagtatgtgcgcagatggactataacgatgaggagatgatagactat
ggcaaccagcttaggcgcagtattttcgaggcttattctggaattcttcaaggattcaaa
aatgccaaagctgaactcatgctccctcatgcccctcatctcctgcagtttattgaattg
gttgcacaagatgaacagagggatacaaatgtgactaaggcagcagtggcagttcagggt
gatctagcagatgcacttggttcgaacataaaaatgctgttcaaagataccaaattttgc
tcaaatctgttatctgagtgcctcgagacagatgacgaacaactgaaatcaacagctata
tgggcccaggagatgataaggcgagcattttcagatagtagctaa
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