Salvia hispanica (chia): 125221809
Help
Entry
125221809 CDS
T09851
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125221809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125221809
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125221809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_6
PAS_9
NANM
F-box-like
F-box
PAS_3
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
125221809
NCBI-ProteinID:
XP_047980029
LinkDB
All DBs
Position
4:5821108..5823725
Genome browser
AA seq
625 aa
AA seq
DB search
MIMEDSEEEKERDRMFRKRLKWGDEADYMDHDARADVFPADRLFYSPELAPTSIIVSDVM
EPDFPVIYVNTVFEFSTGFRADEVLGRNCRFLQFRDPRAKRRHPLVDPVVVSEMRRCLEE
GIEFHGELLNFRKDGTPLINSLRLMPIHSDDGVVTHVIGIQIFTEAKIDLNNVSYPVFKE
TYQHQRDSKLVEPFQEGGGTLHSQQQQQQQEVCALLQLSDEVIAQNILSRLTPRDVASIG
SVCRRIRQLTKNEHVRKMVCQNAWGIDVTGALELITKKLGWGRLARELTTLEAISWKKFT
VGGGVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDVKNPEWRRVSVKCSPPG
RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTPPLPRSWHSSCT
LEGSKLVVSGGCTDAGVLLSDTFLLDLNMDKPMWKEIPSSWTPSSRLGHSLSVYGRTKIL
MFGGLAKTGHLQLRSGDAYSIDLEKEKPEWRQLECGTDVGGQNAVVPPPRLDHVAVTMPC
GRIIVFGGSIAGLHSPSQLFLLDPSEEKPSWRTLNVPGQPPKFAWGHSTCVVGGTRVLVL
GGHNGEEWVLNELHELCLATRQDSP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaagatagcgaggaagagaaggaacgcgaccgcatgtttcggaagcgcctc
aagtggggcgacgaagccgattacatggaccacgacgccagagctgatgtttttccggct
gaccggctattctactcaccggagcttgcgccgacctcgatcattgtctccgatgtcatg
gagccggacttcccggtcatatacgtcaacaccgtcttcgaattctccactggatttcgc
gccgacgaagtcctcggtcgcaactgccgcttcctgcaatttagagacccacgcgccaag
agacgacatccgctggttgatcccgtggttgtctcggagatgagaagatgccttgaggaa
ggtattgaattccacggagagctgcttaacttcaggaaagacggtactcctttaatcaac
agtctgagactcatgccaattcacagcgatgatggtgtggtcacacatgttattggaatt
cagatatttactgaagcaaagatagacttaaataatgtatcatatcctgtgttcaaagag
acatatcagcaccaaagggacagcaagttagtggaaccctttcaagagggtggaggtaca
ctacacagccaacaacaacaacaacagcaagaagtatgtgcgcttttgcagctgtctgat
gaagttatagctcaaaatattctgtcacgattgacaccaagagatgttgcttcgattggg
tctgtctgcagaaggatccggcagttaaccaagaatgaacatgtaaggaaaatggtatgt
caaaatgcatggggaatagatgtcacaggtgcactggagttgataactaagaagttagga
tgggggcgtttggcgagggaacttacgactcttgaagcaatttcttggaagaagttcact
gtaggaggtggagtggagccgtcacgttgcaattttagtgcatgtgctgttggtaatagg
ctggttttgtttggaggtgagggagtgaatatgcagccaatggatgacacgtttgtgctt
aacctcgatgtcaaaaatccagaatggcgtagggtaagtgttaagtgttctcctccaggg
cgttggggtcatacgctctcaagcctgaatggctcatggttggtagtttttggtggttgc
ggaagacaaggattgctgaatgatgtatttgttctcgacttggacgctaagcagccaacg
tggaaagaagtctctggcggaactcctccactgcctagatcctggcatagttcttgcaca
ctagagggctctaagttggtcgtctcaggtggatgcacagacgcaggagtactcctgagc
gacacgtttctgttggatctgaacatggacaagccaatgtggaaagagatcccgtcttca
tggaccccatcatctagattaggccactccctctctgtgtatggacggacaaagatattg
atgttcggtggcctagcaaagacagggcacttgcagctgcggtcaggggacgcatacagc
atcgatctggagaaggagaagccagagtggaggcagcttgaatgcggcacggatgttgga
ggacagaatgcagtggttccacctccaaggctcgaccatgtcgctgtaacaatgccctgt
ggacggatcatagtatttggcgggtcgatagcaggccttcattctccatcgcagctgttt
ttgttggatccgtctgaagaaaaaccatcgtggaggactctgaacgtaccggggcagcca
ccaaagttcgcatgggggcacagcacgtgcgttgttgggggaacccgagttttggttctt
ggaggtcacaacggggaggaatgggttctaaatgaattgcatgaattatgcttagctacg
aggcaggattctccatga
DBGET
integrated database retrieval system