KEGG   Salvia hispanica (chia): 125222231
Entry
125222231         CDS       T09851                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125222231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125222231
   03400 DNA repair and recombination proteins [BR:shis03400]
    125222231
Spliceosome [BR:shis03041]
 Complex B
  Other components
   Prp19 complex
    125222231
 Complex C
   Prp19-CDC5 complex
    125222231
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125222231
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-bind_6 Myb_DNA-binding Hormone_1 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 125222231
NCBI-ProteinID: XP_047980695
LinkDB
Position
4:29358912..29363975
AA seq 947 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGINLRHKKRKRKGIDYNAEIPFEKRPPPGFYDIADEDRPAELVKFPT
TIEELEGERRVDKEARLRKQDIAKNKIAERQDAPSAILQANKLNDPEAVRKRSRLNLPAP
QIPDHELEAIAKMGIASDLLGNEELTEGNAATRALLANYAQTPRYGMTPGRTAQRTPAGK
QDAIMMEAENQRRLTLSQTPLLGGDNPMLHPSDFSGVTPKKKDIATPNPLMTPSATPGGA
TPGGPGLTPRIGMTPTRDVYAVGLTPKGTSMRDELRINEDIDMHDISKVRQSDSKKELIF
SLKNLPQPKNDYQIVIQPLAEEDEELEEKIEEDMSDRIAREKAEEEARQQALLKKRSKVL
QRELPRPPVASLDLIRNTLIRSDEDKSSVVPSTLVEQADELIRKELLSLLEHDNIKYPLD
EKATKEKKKGKHAAKENSVDVPTIDEFEEDELKEADKLIEDEVQYLRVAMGHENESFEGY
VEAHKTCLDDMMYFPTRDGFGLASVATHAEKLASLQNEFEHVKKKMDDETKKAQRIEQKI
KVLTNGYQMRCNKLWAQVEATFKQMDTAGTELECFQALSKQETLAATYRISNLWEEVQKQ
KDLERTLQKRYGDRMAELERVQHLVNAYRLQAERDLENAAKDNDTAMDAIDTTQDQSVAP
DLEAPKDEAMQEPDAAEEAVAKDTAVAEAEADATATQETDAAEEKAAVTKDTVKAGVAAG
DEVIAPTAEPEVQDTDETKGVEVEMESRSKDENDAAEENAEKSAGEA
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggtgtgtggaagaacacagaagatgaaattctcaaggct
gctgttatgaaatatgggaagaatcaatgggccagaatttcttctctgttggtccggaag
tcagccaaacagtgcaaggcccgctggtatgagtggctggatccctcaatcaaaaagact
gagtggacccgagaagaagatgagaagttattacatttggctaaactcatgcccacccag
tggaggacgattgcccctattgttggacgtactccatcacagtgcttggagagatatgaa
aagcttttggatgcagcctgtgccaaggatgagaactatgaacctggtgatgacccgagg
aaattgcgccctggagagattgatcctaatccggaatcgaagcctgctcgtcctgatcct
gtagatatggatgaagatgaaaaggagatgctttctgaagctcgggctcggttagccaac
actaggggtaagaaggcaaaaaggaaagcccgagagaaacagcttgaagaggctcgcagg
cttgcttcattgcagaaaagaagagagcttaaagctgctggaattaaccttcgccataag
aagagaaagagaaaaggaattgattacaatgctgaaattccttttgaaaagagacctcca
cctggcttttatgatattgctgatgaagatcggcctgctgaattagtcaagtttccaaca
acaatcgaggagttggaaggtgaaagaagagttgacaaagaagctcgattgagaaagcag
gacattgcaaaaaataaaatagcagagaggcaggatgctccatctgcaattttgcaagca
aataaactcaatgatcctgaagcagtccgaaaaaggtccaggttaaatctcccagcccca
cagattcctgaccatgagttggaggcaattgctaagatgggaattgctagtgatcttctt
ggaaatgaagaacttacagaaggaaatgctgcaacacgtgctcttcttgcaaattatgcc
cagactccgagatatggaatgactccagggagaaccgctcaaagaactcctgcaggaaag
caggatgctattatgatggaagcagagaaccagcggaggttgactttgtctcagactcca
ttgcttggtggggataatccgatgctgcacccttcagacttttctggggtgactccaaag
aaaaaggatattgcaacaccaaatcctctaatgactccgtctgctactcctggaggtgca
actcctggaggccctggtctgactccgagaatcgggatgacacccacacgtgatgtatat
gctgttggtttgactccaaaaggaacttcaatgagggatgagctgcgcataaatgaagat
attgatatgcatgacatttccaaagtgaggcagtctgattcaaaaaaggaactcattttt
agtctgaaaaatctcccacaacccaagaatgactaccagatagttattcaaccgttggct
gaagaagatgaagaacttgaagagaagatcgaggaagacatgtcagatagaattgctcga
gagaaggccgaggaagaagcaaggcaacaagcattactcaagaaaaggtcaaaagtactg
cagagggagctgccaagacctcctgtggcttcgttggacctcattagaaacactttgata
agatctgatgaagacaagagttccgttgtcccgtcaactttagttgagcaggctgatgaa
ttaataagaaaggagcttttgtctttgttagagcatgataatataaaatatcccctggat
gagaaagcaaccaaggagaagaagaaaggaaaacatgctgcaaaagagaattctgtagat
gtgccaacaattgacgagtttgaagaagatgagctgaaagaggcagataaacttatagaa
gatgaggtccaatatctacgtgttgctatgggccatgagaatgaatcttttgaaggctat
gtggaagcacataaaacatgcttagatgatatgatgtacttccctacacgtgatggcttc
ggtctagcaagtgttgccacccatgcggagaaacttgcctccctgcagaatgaatttgaa
catgtgaagaagaagatggatgatgagactaaaaaagcacagcggattgagcagaagatt
aaagttttaaccaatggttatcagatgaggtgtaataaactttgggcacaagtggaggca
accttcaagcagatggacactgcaggaacggagctagaatgcttccaagctttgagtaag
caagaaactctagcggcaacatacaggatcagcaacctctgggaagaggttcagaagcag
aaggacctcgagcgcactttacagaaacggtatggcgatcggatggctgaactagaaaga
gttcagcatttggtaaatgcatatagactgcaagcagaaagggatcttgaaaatgctgca
aaagacaacgacactgccatggatgccattgacacaactcaagatcaatctgttgcacct
gatcttgaagctcccaaggacgaagcaatgcaagagcccgatgcagctgaagaagctgtc
gccaaggacacagccgtggctgaggctgaggctgatgcaacagcaacgcaagagacggat
gcagctgaagagaaagctgctgtcaccaaggacacggtcaaggctggtgttgcagctgga
gatgaggtaattgcacctactgctgagcctgaagtgcaagatactgatgagacgaagggc
gtggaggtggagatggaatcgagatccaaggatgaaaatgatgctgcggaagagaatgca
gagaagagtgctggcgaagcatag

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