Salvia hispanica (chia): 125223651
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Entry
125223651 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125223651
KO
K14827
pre-rRNA-processing protein IPI1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125223651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125223651
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
125223651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
125223651
NCBI-ProteinID:
XP_047982853
LinkDB
All DBs
Position
4:38128018..38138110
Genome browser
AA seq
862 aa
AA seq
DB search
MVKTKSQSKKSKRGGVDFKKFKRKIGRKLPPPKNSTNTEIKSKAIVLPEQSIASERAGLA
TSKRGLTLKELLQQTSHHNAKSRKDALHGIKDILLNNPDELKLHKLSVVEKLRERIGDDD
EFVRETLYQLFKSVIFPGGTKDNQGPVVSLMMAYVFNAMAHLVLDVRLMAFKFSDLVVQF
YPSSFPFYAEKVLQNYENFLRKNQFLEDKSKLKSILSGLVRCLSLLPCEDREHAAAKNDI
AAPVILHAFEPEIAIEPIGLVDFTRQLKDILPILVACFHDFIPLMHSTSQLDLQSCECMQ
FLLQSIEIIVKLFVGGISESESDTKIIPLCGKPGLTACNKLLPPMILKKLWDAYPLNLVH
LTRKDYRRISMLNTTITQIFLQLKNWDQSPSVLLDKFLEFIESSMATKMQSGKIVHEKDL
VPLIPYIPKLVMQISGSWRPRILQAFTEVFKNSSPESPMKLACIIAIEEMLALGRSSIYL
DESDPSLLSYQISWIQDLPSLLILLDDKSPACSKAVLRLLLYIGQCAPLDSPFSREFDTL
QFRFKDFFCKLVENDKCFGPFIRHAGDIKELAICCLYYFSYMDSLLLQSLVSCCLCNVLE
PLFISRIFEVLQSSFRAGHILVADYISIHVTLLSRFQVYPDPVTESDGKSHWKTFKNVTR
VVCSSLSQIGDDNLVLQMLEKIIVDQICSDIPLDNKCAFVRLLLTLDSKPSRLSDLSVVS
MSHVLPQYMTSVLSNVRYNDEDSMSVISVKRRQYYLLPCFYLIYGSKRLLSLVLNVMGSW
VSEASSSVDRSNTICSIASVLLLMYEDVKVRQILPSCKIEMASVLQNMLNVLTCGEGPNM
TLEERYNIERAYNQLRAITNTE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaacgaaatcccaatcgaagaagtccaaaagaggcggcgtggatttcaaaaaa
tttaagcggaaaatcggccgcaaactgcctcctccgaagaactctaccaacaccgaaata
aaatctaaagcgatagtacttccagagcaaagtatagcttctgaaagggctggtttagca
accagcaaaagggggttgacgttgaaggagcttcttcagcagacaagtcatcataatgca
aaatcccgtaaagatgcattgcatggtatcaaagatatactcctgaacaaccctgatgag
ctgaagttacataaactttctgttgttgaaaaacttcgtgaacgaattggtgatgatgat
gagtttgtccgtgaaacgctttatcaactttttaagtcagtgattttccctggtggtaca
aaggacaaccaagggccagttgtttctttgatgatggcatatgtttttaatgctatggcc
catttagtacttgatgttcgtttgatggctttcaaattttccgaccttgttgtccagttc
tacccctcttctttccccttttatgctgaaaaagttctccaaaactatgaaaatttccta
cggaagaaccagtttttagaggataagagcaaattaaagagcattctatctggactggtt
cgttgcttatcactattgccatgcgaagacagagaacacgcggcagctaaaaatgatatt
gcagctcctgtaattcttcatgcttttgagcctgagattgcaatagaacctattggcctt
gtggattttaccaggcaattaaaggatattttgcctattttagttgcttgtttccatgat
ttcataccattgatgcatagcacctcccaactagatctgcaatcatgtgagtgtatgcag
tttttacttcagagtatagaaatcatagtcaaactttttgttggtgggatttctgaaagt
gaatcggatacaaagattattccattgtgcgggaagcctggtttgactgcatgcaataag
ttactaccaccgatgatattaaagaagttatgggatgcctatcctctcaacctagttcat
cttacgagaaaggattatcgacgaatatcaatgctgaatacaacaattacccaaatattt
ttgcagttgaaaaactgggaccagtctccttcggttttgttggataagtttttggaattc
attgaaagctcaatggctacaaagatgcaatcaggtaagattgtccatgagaaagacttg
gttccacttataccatacataccaaaattagtaatgcaaatctctggtagctggaggcct
cgtatccttcaggcttttactgaggttttcaagaactccagtccagagtctcccatgaaa
ttagcttgcattattgcaattgaagaaatgcttgctcttggaaggagctcaatttacctt
gatgagagtgatccttctttgttatcctatcagatcagttggatacaggatcttccttca
ctgctgattttgttagatgacaaaagtcctgcatgttcaaaggctgtgttacgacttctt
ttgtacatagggcaatgtgctccacttgactctccattctcacgagagtttgatactttg
cagtttagatttaaagatttcttttgcaaactagttgaaaatgacaaatgctttggtccc
ttcataaggcatgcaggagatattaaggagcttgccatttgttgcctttattacttctct
tacatggactctctgcttctgcagtcacttgtttcatgttgcttatgcaatgttcttgag
ccgttattcatttcccgtatctttgaagttctgcaatcttcctttagagctgggcatatc
ctggtagcagactatataagtatccatgtcactttactctcacggtttcaagtttatcca
gatccagtcactgagagtgatgggaaatcacactggaagacatttaagaatgttactaga
gttgtctgttcatctttgtcacagattggtgatgataatcttgtcttgcagatgctggag
aagataattgtcgatcaaatttgttcggatatacctttggacaataagtgcgcctttgtc
agattgcttctcacacttgactcaaagccgtcaagactttcggatctgagtgttgtgagc
atgagccatgttcttccacaatacatgacctctgtgttatctaatgttcggtacaatgat
gaagattcaatgtctgtgatcagtgtaaaaagaagacaatattacttactaccttgcttt
tatctaatttatgggagcaaaaggttattaagtcttgtgttaaatgtgatgggatcttgg
gtatctgaggctagttcctcagttgatcgttcgaatacaatatgtagcattgcctcagta
ctccttctaatgtatgaagacgtcaaggtccgtcagattcttccatcgtgcaagattgag
atggcaagtgtgttacagaatatgctcaacgtactgacttgtggtgaagggccaaacatg
actttggaggaaaggtataacattgagagggcatacaatcagttgagagcaatcaccaac
actgagtag
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