KEGG   Spiroplasma helicoides: SHELI_v1c09490
Entry
SHELI_v1c09490    CDS       T04620                                 
Symbol
cas1
Name
(GenBank) CRISPR-associated protein Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
shj  Spiroplasma helicoides
Brite
KEGG Orthology (KO) [BR:shj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shj03400]
    SHELI_v1c09490 (cas1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shj02048]
    SHELI_v1c09490 (cas1)
DNA repair and recombination proteins [BR:shj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     SHELI_v1c09490 (cas1)
Prokaryotic defense system [BR:shj02048]
 CRISPR-Cas system
  Universal Cas proteins
   SHELI_v1c09490 (cas1)
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AOG60898
UniProt: A0A1B3SLU1
LinkDB
Position
complement(1072395..1073300)
AA seq 301 aa
MSWKTIIIKDGEKVSLFLNNLVVESLQTKYHIPLDDINAILFENYKTVITNRIMNKLSEK
KVLAIICDTNLKPVSLIQPIDAHHLQLKIINNQLNWKKEDKLYLWTQIVKQKIEAQIDIL
KLNFKNMSKIQLLYKYIDELQYRDSTNREGHAAKVYFKELFGNKFTRDQDNHINIALNFG
YTIVRTAFIRAIISKGLHPSIALFHHNMYNAFALADDLMEPFRPIVDNFVYKYVMQIDYF
SRNHKLQIINILNCKVIYDNKKIFLTDAITKYVEMVIEYFENKNTLNIEYPISSSVEYYE
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcttgaaaaacaataattataaaagatggagaaaaggtaagtttatttttaaataat
ttagtagttgaaagtttacaaacaaagtatcatataccacttgatgatatcaatgctatt
ttatttgaaaactataaaacagtgattacaaatagaataatgaataagttatctgaaaaa
aaggttttagcaataatttgtgatactaatttaaaacctgtttcattaattcaaccaatt
gatgctcatcatttgcagttaaaaataataaataatcaattaaactgaaaaaaagaagat
aaattgtatttgtgaactcaaattgttaaacaaaaaatagaagcacaaattgatatacta
aaacttaattttaaaaatatgagtaaaatacagcttttatacaaatatattgatgagtta
caatatagagactctactaatagagaaggtcatgcagcaaaagtttattttaaagaactt
tttggtaacaaatttacaagagatcaagataaccatataaatatagccttaaactttggt
tatacaattgtaagaacagcttttataagagcaattatttctaaaggtttacacccaagt
atcgccttatttcatcacaatatgtataatgcttttgcattagcagacgatttgatggaa
ccctttagaccgattgtagataattttgtttataaatatgttatgcaaattgattatttt
tctagaaatcataaactacaaattattaatattttaaattgtaaagtaatttatgataat
aaaaaaatatttttaacagatgcaataactaaatatgttgaaatggtaatagaatatttt
gaaaataaaaacacattaaatattgaatatcccataagttcttcggttgagtactatgag
ttatag

DBGET integrated database retrieval system