Shewanella halifaxensis: Shal_0385
Help
Entry
Shal_0385 CDS
T00654
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shal_0385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_0385
Enzymes [BR:
shl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shal_0385
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shal_0385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
RecG_dom3_C
ResIII
tRNA_anti-codon
AAA_30
SecA_DEAD
SNF2-rel_dom
nSTAND3
BrxC_BrxD
IstB_IS21
PhoH
AAA_16
ERCC3_RAD25_C
Zot
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ABZ74960
UniProt:
B0TPT9
LinkDB
All DBs
Position
complement(450002..452092)
Genome browser
AA seq
696 aa
AA seq
DB search
MSANRLQRLDLVPITDLKGVANKMAERLAKLSITTVQDLLFHLPLRYEDRTQVYPIASLY
PGSYGTIEAVIQSSQIIQGRKRMLTCTVRDDTGSLTLRFFNFSVAQRNGLEIGMTIRAYG
EIRRGKHFAEIIHPEYKLISPGEDLQLSDTLTPVYPTTEGLKQASWIKLTEQALAMLDNG
GLQELLPPNLQPNNLDLKQALQILHRPNNQVSLFELEQGTHPAQQRLIQEELLAHNLSML
RLRQRSNRDKAVSMHATGQLLNPFLASLPFKPTGAQQRVVADITQDLAKHEPMMRLVQGD
VGSGKTLIAALAALQAIESGYQVAMMAPTELLAEQHALNFSSWFEPLGLKVGWLAGKLKG
KARAQSLADIESGDAHIVIGTHAIFQEQVVFNKLALIIIDEQHRFGVHQRLGLREKGISQ
GFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAISEQRRDEVIDRVRQ
AAINDKRQTYWVCTLIEESEVLECQAAEDTAEELKRVLPELKVGLVHGRMKPAEKQQIMA
DFKAGELNLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLL
YKPPLSATATKRLGVLRQSNDGFVIAQQDLEIRGPGEVLGTKQTGIADMKIADLMRDEAL
IPHVQKLAAHVMQQAPTSVDAIIERWLGDREQFVQA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgctaaccgtttgcaaagactcgatcttgttcctataacagatcttaagggcgtc
gccaacaagatggccgagagattagccaagctgagtataacaacagtgcaagacctgttg
tttcatctgccgcttcgctatgaggatcgcactcaagtctacccaattgcctcgctttac
ccgggcagttacggcaccatcgaagccgttattcaatcaagccagattattcaaggccgt
aagcgcatgctgacctgcacggtgcgcgatgatactggcagcttaactctgcgctttttt
aatttctctgtcgcgcagcgcaacggcctagagataggtatgaccattcgtgcctatggt
gaaattcgccgcggtaagcattttgcagagatcattcatccagaatacaagttgatctcc
cctggtgaagatctgcagctgagcgacacattgacgccggtttaccccacgaccgagggc
ctaaaacaagcaagctggattaagctcaccgagcaagcacttgccatgttagacaatggc
ggcttacaagaattactgccgccaaacctgcagccaaataacttggatttaaagcaagcg
ttgcaaatcctgcatcgacctaataatcaggtgtcgctatttgagctggagcaaggcact
catccggcgcagcaacgcctgattcaagaagagttactggcccacaacttgagtatgtta
cgcctacgtcagcgtagtaaccgcgacaaagcagtcagcatgcatgccacggggcagtta
ctcaatccgtttttagcctcgctcccctttaaacctactggggcgcagcaacgagtggtt
gcagatataacccaagatttagctaagcacgagccgatgatgcgcctagtacaaggtgat
gtgggttcaggtaagaccttgattgcagcccttgcggcactgcaagcgatagaaagcggt
taccaagtggccatgatggcgccaaccgagctattggccgagcaacacgcgctaaacttt
agcagctggtttgaaccattaggccttaaagtcggctggcttgcaggtaagttaaaaggt
aaggccagagcccagtcgttagccgatattgaatcaggcgatgcccacattgtcataggt
acccatgctattttccaagagcaagtggtgttcaacaagctggcactgattattatcgat
gagcagcataggtttggcgtacatcaacgcttaggtctgcgagaaaaaggcatcagccaa
ggctttcatcctcaccagttaattatgaccgcgactcccattccgcgcacgctcgccatg
acggcctatgccgatctcgatacctcgattatcgatgaacttccaccgggaagaacgccg
gttaccacagttgcaatttccgagcagcgtcgagatgaggtgatcgatcgagtcagacaa
gccgccattaacgacaagcgccaaacttactgggtatgcaccttaatcgaagagtctgaa
gtactcgaatgccaagctgcagaagacacggcagaagaacttaaacgcgttctgcccgag
ttaaaggttggcttagttcatggtcgtatgaagcctgcggagaagcagcagatcatggcc
gactttaaagcaggtgagctaaatctattagttgccactacagtgattgaggtcggtgtt
gatgtgcccaatgccagtttgatgatcatcgaaaaccccgaacgtttaggcttagcacag
ctgcatcagcttagaggccgcgttggccgtggcgcagtggccagccactgcgtgctgcta
tacaagccgccgctatctgcaacagccaccaagaggctcggcgtactcaggcagagtaat
gacggctttgtgattgctcagcaagacttggagatccgtggaccaggtgaagtattaggc
accaaacagactggcatcgccgatatgaagattgccgacctgatgcgcgatgaagccctt
attcctcatgtgcagaaactggctgcacatgttatgcagcaggcacctacgagtgtcgat
gccattattgagcgctggcttggcgatagagagcaattcgtacaagcgtaa
DBGET
integrated database retrieval system
