Shewanella halifaxensis: Shal_0766
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Entry
Shal_0766 CDS
T00654
Name
(GenBank) TonB-dependent receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_0766
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_0766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABZ75341
UniProt:
B0TTJ8
LinkDB
All DBs
Position
complement(949200..951389)
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AA seq
729 aa
AA seq
DB search
MSHRKTLSLSLLSTALLTALSPQIMAQESDSQATMEQISIFGKQNPLNTVPGSAYKINQA
ELDTFKYTDIMRTLASIPGVYIQEEDGYGLRPNIGMRGTGQNRSEKISIMEDGVLAAPAP
YASPAAYYFPTPGRMQSIEILKGSSTVKYGPRTTGGVINMLSRQIPEEELAGKLDVAAGQ
DGFGKLHAYAGGQGERVGAVVDFYRYQADGFKHINGVGGDTGFEKNDALAKVSIRSADDA
KYAQVLEFKLKYSDEVSNETYMGLTDSDFETTPYARYSASQKDVMNTEHKQLQINHIIDF
SNNLTLGTTAYYNDFARNWYKADQVDGLKLNKGGIEAASAFDKNPSTAPMDVRVKANNRS
YISQGIQTELNWYLDSHDLAFGARYHEDEMDRFQWADHYNLDSNQVMTLTESGIPGSDSN
RVDSAKALALYVQDKIQLGDFNITAGVRYEDVKTNRTDWGKENPGRDGQPSKDIDNSFSA
TLPSLSATYQINSEFLVLAGVQKGFAPASPGNSDKKEEQSWNYEAGARYNAGELSSEAIF
FYSDYSNMHGECTASIGCDDDNIGNQYNGGEVDVKGLEFSLDYSFNTQNDISFPVKLAYT
YTDAEFANSFKSDFDPWGDVTKGDKLPYIAENMLFASAGVKVDSWELTVAARYSDDIRTK
AGQGEIAQEDLIKAKTIVDLSARYFISESQELYLTAENLFDEKYVTSKVHGSNFVGKPLT
VSVGYTYTF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccgtaaaacgctatctttaagtttactttcaactgcactgctcactgcgctt
tcgcctcaaataatggcacaggagtcagactctcaggcgaccatggagcagataagtatc
tttggtaagcaaaacccactcaataccgttcctggtagtgcatataagatcaatcaagcc
gagctagataccttcaaatacacagatatcatgcgcacactcgcgagtatcccaggcgtg
tatattcaggaagaggatggctacgggttaagaccgaatattggtatgcgtggcacagga
caaaaccgctctgaaaaaattagcattatggaagatggtgtcttagcggcgccagccccc
tatgcctcccccgccgcctattactttccaacgcctggcagaatgcaatcaatcgaaatt
ctaaaaggtagctcgaccgttaaatatggaccaagaaccacagggggcgtgatcaatatg
ctctctcgtcagatcccagaggaggagctagcaggcaaactcgatgttgctgcaggccaa
gatggcttcggaaagctccatgcctatgccggtggtcagggagaacgagtcggtgcggta
gtagacttctatcgctatcaagccgatggctttaaacatatcaacggagtcggtggcgac
accggctttgagaagaatgatgcactggcaaaagtgagcattcgctccgcagacgatgcc
aaatatgcgcaggtgctagagtttaagctgaaatattcagatgaggtttcaaatgaaact
tacatgggattaacagatagcgatttcgaaacgacaccctatgctcgttactcggcctcg
caaaaagatgtgatgaacaccgaacataagcagttgcagatcaaccatattatcgacttt
agcaacaaccttaccctaggaaccacagcctattacaacgattttgcccgcaactggtat
aaagccgatcaagtcgacgggcttaaactcaataaaggtggcatcgaagcggcctctgca
tttgataaaaatccatcaacggcgccaatggatgtacgcgttaaggcgaataaccgtagc
tatatttcacaggggatccagactgaacttaactggtatctcgatagccatgatctggcc
tttggcgctcgctatcatgaagatgagatggatagattccagtgggccgaccattataat
ctagactcgaatcaggtgatgacattaaccgagagtggtatccccggcagtgactctaac
cgcgtagatagcgcaaaagccttggcgctttacgttcaggacaagatccagctaggggat
ttcaacattactgcaggagttcgctacgaagatgttaagaccaatcgtaccgactggggt
aaagagaacccaggacgtgacggtcagccaagcaaagatatcgacaatagtttctcggca
accttaccttcactctcggcaacctaccagataaacagcgagttcttagtgctagctggc
gttcagaaggggtttgcgcctgcttctcccggtaattccgataaaaaagaggagcagagt
tggaactatgaggccggcgcccgctataacgctggcgagcttagttcagaggcgatcttc
ttctacagtgattacagcaatatgcatggtgaatgtacggcatctatcggttgtgatgat
gacaatattggtaaccaatacaatggtggcgaagtcgatgttaagggattggagtttagc
ctagattatagctttaacactcaaaacgatatcagctttccagtgaagcttgcctatacc
tacacagatgccgagtttgctaatagctttaagtctgatttcgacccatggggtgatgta
acgaaaggagataaacttccctatatcgctgaaaatatgttgtttgcttcagctggtgtc
aaagtcgacagctgggagcttactgttgcagcccgctacagcgatgatatacgcaccaaa
gctggccaaggtgaaattgcgcaagaggatctaatcaaagcgaaaaccattgtcgactta
tctgcccgttatttcatcagcgaatcgcaggagctttacctcaccgctgaaaacctattc
gacgaaaaatatgtcacctcaaaagtccatggttccaactttgttggcaagccgttgacc
gtgtcagtaggctatacatatacattttaa
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