Shewanella sp. ANA-3: Shewana3_3920
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Entry
Shewana3_3920 CDS
T00428
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00630
Glyoxylate and dicarboxylate metabolism
shn00680
Methane metabolism
shn01100
Metabolic pathways
shn01120
Microbial metabolism in diverse environments
shn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewana3_3920
09102 Energy metabolism
00680 Methane metabolism
Shewana3_3920
Enzymes [BR:
shn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shewana3_3920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
ABK50138
LinkDB
All DBs
Position
1:4709123..4711975
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AA seq
950 aa
AA seq
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MKLTRKSDVAQVADKPTLGISRRQFMKQAGITTGGIAAASLMGTGMMRRAEAKDVPHDAP
IEVKRTICSACAVGCGLYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKRLK
YPMKLVDGKWKKISWEDAINEVGDQMLNIRKESGPDSVYFMGSAKFSNEGCYMYRKLAAM
WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDIQNANAIFLIGANPAEAHPVSMQH
ILIAKEKNNAKIIVVDPRFSRTAAHSDLHCAIRPGTDIPFIYGMLWHIFENGWEDKTFIQ
QRVFEMETIREEVKKFPPKEVADITGVSEEVVYQAAKLMAENRPGTVIWCMGGTQHHVGN
ANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQGATDLGLLFDNLPGYYGLTSAAWTHWT
HVWDLDMEWVKSRFDQNAYLGKDPMTTPGIPCSRWHDGVLEDKSKLAQKDNIRMAFFWGQ
SVNTETRQREVRDALDKMDTVVVVDPFPTMAGVMHRRKNGVYLLPAATQFETQGSVSNSG
RSIQWREQVIQPLFESKTDIEIMYRLAQKLGIAEQYTKRIAKENGLPVIEEITREINRGM
WTIGMTGQSPERIKLHTQNWGTFSNKTLEAAGGPAKGETYGLPWPCWGTPEAKHPGTQIL
YNQSKHVKDGGGNFRARYGVEYNGKNLLAEGSFSKGAEIQDGYPEFTDKLLKQLGWWDDL
TAEEKAEAEGRNWKTDLSGGIVRVAIKHGCIPFGNAKARCIVWTFPDQVPVHREPLYTAR
RDLVAKYPTYDDMQVHRLPTLYKSIQEKDFSGKYPLVLTSGRLVEYEGGGEESRSNPWLA
ELQQEMFVEINPGDAADRGIRNGEFVWLEGAEGGRIKVQALVTPRVKPGVTFMPYHFAGV
MHGESLAPNYPEGTVPYVIGESANTALTYGYDPVTQMQETKASLCQIVKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaactcgcaagtccgatgtcgcccaagtggccgacaaaccgacgttaggcatt
agccgtcgtcaatttatgaagcaagcaggtattactactggtggtatcgcagccgcttct
ctgatgggtacaggcatgatgcgccgcgcagaagccaaagatgtgccacacgacgcgccg
atcgaagttaaacgtacgatttgtagtgcctgtgctgtgggttgtggtctgtatgccgaa
gtgcaaaatggcgtgtggacaggtcaagaacccgcgttcgatcacccattcaatgccggc
ggtcactgcgcgaaaggtgctgcactgcgtgagcatggccacggtgaaaaacgcctgaaa
tacccaatgaaattggttgatggcaagtggaaaaaaatctcttgggaagatgcgattaac
gaagtgggcgaccaaatgctcaacattcgtaaagaatctggcccagactctgtgtacttc
atgggtagcgctaagttctctaacgaaggctgctatatgtaccgcaaactggcggccatg
tggggcacaaacaacgtcgaccactctgctcgtatttgtcactctaccacggtagccggt
gttgctaacacttggggttacggtgcgcaaactaactctttcaacgacattcagaatgcc
aatgccatcttcctgatcggggcaaacccagcagaagcgcatccggtttcaatgcaacac
attctgatcgccaaagagaaaaacaacgcgaaaatcatcgttgttgacccacgtttctct
cgcacagcggcgcactcagatctgcactgtgcaattcgtcctggtactgatattccgttt
atctacggtatgttatggcacattttcgaaaacggttgggaagataaaacctttatccaa
caacgcgtattcgagatggaaaccatccgcgaagaagtgaaaaagttcccacctaaagaa
gtggcggatatcactggcgtgagcgaagaagtggtttatcaagccgcaaaactgatggca
gaaaaccgtccgggtactgtgatttggtgtatgggtggtactcagcaccacgtcggtaac
gctaacactcgtgcttactgtattctgcaattagccttaggcaacatgggcgtttctggc
ggcggcactaacattttccgtggccacgacaacgtacagggcgcgactgacttaggtctg
ctgttcgacaacctgcctggctactacggtttaacctcagccgcttggactcactggacc
catgtgtgggatctggatatggagtgggtgaagagccgcttcgatcaaaacgcctactta
ggcaaagatccaatgaccaccccaggtattccttgttctcgctggcacgatggcgtgtta
gaagataagagcaagctggcacagaaagacaatatccgtatggccttcttctggggtcaa
tcggtcaacactgaaacccgtcaacgtgaagtgcgtgatgccttagacaagatggacaca
gtcgtggttgtcgacccattcccaaccatggcgggtgttatgcaccgtcgtaagaatggc
gtgtatctgttacctgctgcgactcagtttgaaactcaaggttcagtgtctaactcaggc
cgttctatccaatggcgtgagcaggttatccaacctttattcgagtcaaaaaccgacatc
gaaatcatgtaccgtttagcgcaaaaactcggtatcgccgagcaatacactaaacgcatc
gccaaagaaaacggcttaccggttatcgaagaaatcacccgcgaaatcaaccgcggcatg
tggaccatcggtatgacaggtcaaagccctgagcgtatcaagctgcacacccaaaactgg
ggcactttcagcaacaagacgctcgaagccgccggcggcccagctaaaggcgaaacctac
ggtttaccttggccatgttggggcacaccagaagctaaacaccctggtacccaaattctg
tataaccaatctaaacacgttaaagacggcggcggtaacttccgtgctcgttacggcgtt
gaatacaatggtaaaaacctgctggctgaaggctctttctctaaaggtgccgagatccaa
gacggttacccagaatttaccgataagctgctgaagcaactcggttggtgggatgacctg
actgcggaagaaaaagccgaagccgaaggtcgtaactggaagaccgacttatcaggcggt
atcgtgcgcgtggcaatcaagcatggttgtattccatttggtaacgctaaagcccgttgt
attgtttggactttcccagaccaagtgccagttcaccgcgagccgttatacacagcacgc
cgtgacttagtggctaaatacccaacctacgacgatatgcaagttcatcgtctgccaaca
ctgtacaagtcaatccaagagaaagacttcagtggcaagtacccactggtactgacctct
ggtcgtttagtggaatacgaaggtggtggtgaagaatctcgttctaacccatggctggct
gagcttcaacaggaaatgtttgttgaaatcaacccaggcgacgcagccgaccgcggtatc
cgcaacggtgagtttgtgtggttagagggcgccgaaggtggccgcattaaagtacaagct
ctggtaacgccacgcgttaaaccaggtgtgacctttatgccataccactttgcgggtgtg
atgcacggtgaaagcttagcgcctaactaccctgagggcactgtgccttacgttatcggt
gaatccgctaacacggcactgacctatggttatgaccctgtgactcaaatgcaggaaacc
aaagcgtcgctctgtcagatcgttaaagcgtaa
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