KEGG   Staphylococcus hominis: EGX58_00265
Entry
EGX58_00265       CDS       T06045                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
shom  Staphylococcus hominis
Pathway
shom02024  Quorum sensing
shom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EGX58_00265 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EGX58_00265 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shom03019]
    EGX58_00265 (hfq)
   03036 Chromosome and associated proteins [BR:shom03036]
    EGX58_00265 (hfq)
Messenger RNA biogenesis [BR:shom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EGX58_00265 (hfq)
Chromosome and associated proteins [BR:shom03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    EGX58_00265 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 DUF4809 LSM StiP
Other DBs
NCBI-ProteinID: AYY65417
LinkDB
Position
complement(14836..15078)
AA seq 80 aa
MIANQNIQDQALENFKAEQTEITVFFLNGFQMKGVIEDFDKYMISLVSQGKQHLIYKHAI
STFTVDTESTDSEATGEGEE
NT seq 243 nt   +upstreamnt  +downstreamnt
atgattgcaaaccaaaacatccaagatcaagcactagagaactttaaagcagaacaaacg
gaaattactgtatttttcttaaatggttttcaaatgaaaggcgttatcgaagactttgat
aaatacatgattagcttagtttctcaaggcaaacaacatttgatttacaaacatgcgatc
agcactttcactgtggatacagaatctactgattcagaagctacaggtgaaggtgaagaa
taa

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