Sturnira hondurensis: 118978716
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Entry
118978716 CDS
T07222
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
shon
Sturnira hondurensis
Pathway
shon04151
PI3K-Akt signaling pathway
shon04510
Focal adhesion
shon04512
ECM-receptor interaction
shon04820
Cytoskeleton in muscle cells
shon04974
Protein digestion and absorption
shon05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118978716 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118978716 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118978716 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118978716 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118978716 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118978716 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shon00535
]
118978716 (COL9A1)
Proteoglycans [BR:
shon00535
]
Extracellular matrix (ECM) proteoglycans
Others
118978716 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
118978716
NCBI-ProteinID:
XP_036890227
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MKTFWKIPVFFSVCSFLGPWTSATVVKRRPRFPVNAISNGENELCPKVRIGQDDLPGFDL
ISQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRM
TGSTLEKNWSIWQIQDSSGKEEVGVKINGQTKSVAFSYKGLDGSLQSAVFSDLPSLFDSQ
WHKIMIGVERSTATLFVDCNRIESLPIEPRGQISVDGFAVLGKLAENPQVSVPFELQWML
IHCDPLRPSRETCHELPPRITPSQLFDQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKG
PPGPPGPPGDPGKPGAPGKPGIPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGI
PGPPGPPGGAGLPGELGRVGPIGDPGKRGPPGPPGPPGPSGTIGFQDGDPLCPHACPPGR
SGYPGIPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEVGAQGPPGTQGLRGITGITGD
KGEKGARGFDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGLPGSKGDTGL
PGVDGREGIPGMPGTKGDPGKPGPPGDAGLQGLPGVPGIPGAKGIAGEKGTTGAPGKPGQ
LGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPMGPPGPLGKLGSPGSPGLPGLPGPPGL
PGMKGDRGVVGEPGPKGEQGPSGEEGEAGERGELGDIGLPGAKGTVGNLGEPGLRGPEGG
RGLPGVEGPKGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAA
SLKRPDSGASGLPGRPGPPGAPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGE
KGERGPPGRGPKGLPGTAGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPG
FCEPASCTVQAGQRAFSKGPVQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttctggaaaattccagttttcttctctgtatgcagttttctgggaccctgg
acatctgcgactgttgtcaagcgtcgcccaaggtttcctgtcaatgcaatttctaatggt
gaaaatgaactctgtccaaaagtcagaattggccaagatgatttaccagggtttgacttg
atttctcagttccaggtagataaagcagcgtccagaagagctatccaaagggtagtggga
tcaactgcattgcaagtggcttacaaattggggaataatgtagacttcaggattccaacc
aggcatttatatcccagtggactgcctgaagaatactcctttttaaccacttttcggatg
actggaagcacacttgaaaagaactggagcatttggcagattcaggattcctcggggaag
gaggaagttggcgtgaagattaacggccaaacaaaatctgtcgcgttttcctacaaggga
ctggatggcagtctccagtctgcagtcttttcagatttgccctccttgttcgattcccag
tggcataagatcatgattggtgtggagaggagcacagctaccctttttgttgattgcaac
aggattgaatccttacctatagagccaagaggccaaatcagtgtcgatggctttgctgtg
ctgggaaaacttgcagagaatcctcaagtttctgtaccatttgaacttcagtggatgctg
atccattgtgacccacttcgaccaagcagagaaacttgccatgagctgccaccaaggata
acgcccagccaacttttcgaccagagaggtcccccaggtgagcagggtccccctgggccc
ccgggcccccctggagttcccggcatcgacggcatcgatggtgacagaggtccaaagggt
cccccgggccccccgggtcctcctggagatccaggaaagccaggagctccgggcaagcct
ggcatacccggagctgacggattaacagggcctgatggatcccctggctctgttggacca
agaggacaaaaaggagaaccaggggtgccgggatctcgtggatttccaggccgtggtatc
cctggaccccctggtccccctgggggagcaggtcttcctggagagcttggccgtgttgga
ccgattggtgaccctgggaaaagaggaccacctggcccccctggacccccaggacccagt
ggaacaattggctttcaagacggagatccattgtgtccccatgcctgcccaccaggtcgt
tcaggatacccaggcatacccggcatgaggggtcataaaggggctaaaggagaaattggc
gaacctggaagacaaggtcacaagggcgaagaaggtgaccagggagagccaggagaagtc
ggagctcaaggacctccaggaactcaaggactgagagggatcactggcataactggggac
aagggagaaaaaggcgctcggggctttgatggagaacctgggcctcagggtattcccggg
gcacctggtgatcaaggacagcgagggcctccaggagaagcaggtcccaagggagacaga
gggcctcaaggttctagaggaattcctggcctccctgggtccaaaggagacacgggcttg
ccaggtgttgacggccgtgaagggatacctggaatgcctggaacaaagggtgaccctggg
aagcctgggcctcctggtgacgcaggattgcaggggctacctggtgtgcctggaattcct
ggtgcaaagggtattgccggtgaaaagggtaccaccggtgccccagggaaacctggccag
ttggggaattcgggcaaaccgggtcaacagggaccaccaggagaggtgggaccccgaggg
ccccggggacttcctggcagtagaggagaaataggacccatgggacccccgggcccacta
ggcaaactgggttccccggggagccctggcctcccaggcttgcctggcccccctggactt
ccgggaatgaaaggcgacaggggtgtcgttggtgaacctggtccaaagggtgaacagggt
ccatctggtgaagaaggtgaagcaggagaaaggggtgaactcggagatataggattacct
ggagcaaagggaactgtgggtaaccttggggagcctggcttgagggggcccgaaggaggt
cgggggctccctggcgtggaaggaccgaagggaccccctggaccccgaggtgtgcaggga
gaacagggtgccacaggcctgcctggcatccagggccctccggggagagcaccaacagat
cagcacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgct
agcctcaagcgtccagactcaggggcttctggcctccctgggaggcctggaccccctggt
gccccagggccccctggagagaatggcttcccaggccagatgggacttcgtggcctccca
ggcattaaagggcccccgggtgctctcggtttgagggggcctaaaggtgacttgggagaa
aagggggagcgcggccctccaggaagaggtcccaagggcttgcctggaactgcaggtctc
ccaggtgatccgggccctgccagctatgggaggaatggccgggatggcgagcgaggccct
cctggggtggcaggaattcctggcgtgcccggccccccgggccctcctggcctccctggt
ttctgcgagccagcctcctgcaccgtgcaggctgggcagcgggccttcagcaaagggcca
gtgcagtga
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