Sturnira hondurensis: 118983913
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Entry
118983913 CDS
T07222
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
shon
Sturnira hondurensis
Pathway
shon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118983913 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118983913 (CNOT1)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118983913 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118983913 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
118983913
NCBI-ProteinID:
XP_036897492
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLGPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaggatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcagatagacgcttttcttaagacattgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagagtgtcgcaatataatcgtgcagttt
ggtgttcgggaggttacagctgcccaggttgcaagagttttaggaatgatggctcgaact
cattcaggattaacagatggaattccactacagagtatctctgctcctggcagtgggatc
tggagtgacgggaaagataaaagtgatggagcacaggcacatacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaattttaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtctgggtatggaagtattcccagtagacctaatatatagaccttggaaa
catgcagaaggccagctctcattcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctcctgaggctt
gcagaggtgggtcagtatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccggacatgctggtattggccttattacaaatcaacacctcctggcacaccttgcgccat
gaactcatctccactctgatgccaatattcctcggaaaccatcctaactctgctattatt
ttgcactatgcatggcatggtcagggacagtctccctccatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtacgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttatcgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaaatgg
ctcacagataaaattcgagaacatggagagccttttatccaagcatgcatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcgggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtagccaattgcagtaatgtt
atgaataaggccaggcagccaccacctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatatctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaggcgtttccacccctttctacccca
aatcaaacaactgcattcagtggtattggaggactttcatcacaactgccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcccttggacttcctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaactatgtctgttgatgaggtattagaaatgctacagagatttaaagactccacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggcctagccctgagatacgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcacttacaggagtatatcgagtatggacagcagtccagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caagctcaggcccaagttccagcaaaagcacctcttgctggtcaggttagcactatggta
accacctcaacaaccacaactgttgctaaaacggttactgtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatacaacaaatatagatacgttgcttgtg
gccacagaccagacggaaagaattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacgctgaagaatcctgaa
tttaataagatggttttaaatgagacctacagaaacatcaaagtgttactgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataaacccatcttacatactgacttggatgtaaaatctttg
ctgctagaggcctatgttaaaggacagcaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtctagtattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctgaaggataaagatcgcctaaagaacttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacctgtacagccacggttccaccacagccacagtacagctatcat
gacatcaatgtgtattccctcgcaggccttggaccacacattactctaaacccaacaatt
cccttgtttcaggcccacccacagttgaagcagtgcgtgcgccaggcaatcgaacgtgct
gtccaggagttggtccatcctgtggtggatcgatcaattaagatcgccatgactacttgc
gagcaaatagtgaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagctcttcgtactgct
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaaccgaatttgagctgagaaaacatgctaggcaagaaggacgcaggtac
tgtgatcctgttgtattaacataccaggctgagcggatgccagagcaaatcaggctgaaa
gtcggtggtgtggaccccaaacagctggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcaacccacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcaaatttatgataagtgcattacagaactagag
cagcacctacatgccatcccaccaacgttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaattctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttattagatgctacaagtggtgctgatgctgaccta
ctgctgcgttacagggaatgtcacctcttggtcttaaaagctcttcaagatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaaccatttggttaacatgcag
cagtatgatcttcacctagctcagtcgatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctgttccacaccattgagaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcgatg
atcgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctgtgtactgagatgtgtgtcgagatcagttaccgagct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctac
cacaacctggatgccttcgtccgactcattgcactgctagtgaagcactcaggggaggcc
agcaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggaccatgatgttcggcaaagtgaattccagcagcttccctaccatcgaatt
tttattatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacgttccacatcctgaggcctaccaaagctcctggc
tttgtgtatgcctggctcgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaaggggtggccaatgtatgcacagttactgattgatttattcaaa
tacttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttctgcatgatttccctgaattcctttgtgattac
cattatggattctgtgatgtgatcccacctaattgtatccagctaagaaatctaatcctg
agtgccttcccaagaaacatgaggcttccagacccattcactcctaatctgaaggtggat
atgttgagtgaaataaacatcgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcggtcaccggtcacttttcta
tctgatctgcgcagcaacctgcaggtatccaatgagcctggcaatcgctacaacctgcag
ctcattaacgcactggtgctctatgtcgggactcaggccattgcgcacatccacaacaag
ggcagcacaccttcaatgagcaccatcacccactccgctcacatggacatattccagaac
ctggctgtggacttggacactgaaggtcggtatctcttcttaaatgcaatagcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctatacctttttgca
gaagccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctgcttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttgttc
cagtcggtcgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
