KEGG   PATHWAY: shr03050
Entry
shr03050                    Pathway                                
Name
Proteasome - Sarcophilus harrisii (Tasmanian devil)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
shr03050  Proteasome
shr03050

Other DBs
GO: 0000502
Organism
Sarcophilus harrisii (Tasmanian devil) [GN:shr]
Gene
100914521  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
100914872  PSMB10; proteasome subunit beta type-10 isoform X2 [KO:K02733] [EC:3.4.25.1]
100915095  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
100915465  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
100915675  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
100916594  PSME2; proteasome activator complex subunit 2 [KO:K06697]
100917209  PSMA6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
100917535  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
100918897  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
100919883  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
100920478  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X2 [KO:K03029]
100920479  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 isoform X1 [KO:K03036]
100920574  PSMC2; 26S proteasome regulatory subunit 7 isoform X1 [KO:K03061]
100921124  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
100921265  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
100921548  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
100921684  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
100921704  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
100921743  ADRM1; proteasomal ubiquitin receptor ADRM1 isoform X2 [KO:K06691]
100922728  PSMC5; 26S proteasome regulatory subunit 8 isoform X1 [KO:K03066]
100923039  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
100923300  PSMC6; 26S proteasome regulatory subunit 10B [KO:K03064]
100923392  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
100923814  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
100924260  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
100924826  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
100924888  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
100925706  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
100925826  PSMA3; proteasome subunit alpha type-3 isoform X1 [KO:K02727] [EC:3.4.25.1]
100926409  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
100927073  POMP; proteasome maturation protein [KO:K11599]
100927917  PSMD6; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
100928236  PSME1; proteasome activator complex subunit 1 isoform X1 [KO:K06696]
100929199  PSMA8; proteasome subunit alpha-type 8 isoform X1 [KO:K02731] [EC:3.4.25.1]
100930249  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
100931153  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 isoform X1 [KO:K03028]
100931496  PSME3; proteasome activator complex subunit 3 isoform X1 [KO:K06698]
100932408  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
100933180  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
100933723  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 isoform X2 [KO:K03030]
100934267  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
100934809  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
105750683  IFNG; interferon gamma [KO:K04687]
116423204  PSMB8; proteasome subunit beta type-8 isoform X1 [KO:K02740] [EC:3.4.25.1]
116423205  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
shr04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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