Sarcophilus harrisii (Tasmanian devil): 100915878
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Entry
100915878 CDS
T02286
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04136
Autophagy - other
shr04140
Autophagy - animal
shr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100915878 (ATG16L1)
04136 Autophagy - other
100915878 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100915878 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100915878 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
shr03029
]
100915878 (ATG16L1)
Membrane trafficking [BR:
shr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100915878 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
100915878 (ATG16L1)
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100915878 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_ACSF4
INO80F
PUMA_CC
CCDC93_CC
HEF_HK
Beta-prop_WDR19_2nd
Tricorn_N
WHD_CYT4
Lipoprotein_6
V_ATPase_I
Fez1
Phage_GPO
NPV_P10
Motif
Other DBs
NCBI-GeneID:
100915878
NCBI-ProteinID:
XP_031824038
Ensembl:
ENSSHAG00000004639
UniProt:
A0A7N4P1V4
LinkDB
All DBs
Position
4:456772423..456800513
Genome browser
AA seq
624 aa
AA seq
DB search
MSAGLRGAGLPSWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLQSVLADKLQAEK
YDLQGRHEISPGHDGMWNDAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAECLQKISELETECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLVDEASDAAEETSPIRAISRTATKRLSQPAGGLLDSITNIFGLSESPLLGHHPSSDAA
RRRSVSSLPVPQDNPDAHPTSNKEVRVPTTAVYVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVFGDKCEAKGSLSGSNAGITSIEFDSAGSYLLASSNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIIRELELLGKITALDLNPERTDLLSCSRDDLLKIIDLRVNAVK
QTFSAPGFKCGSDWTRVVFSPDGSYIAAGSAEGSLYIWNVLTGKVEKVLSKQHSSSINAV
AWSPSGTQVVSVDKGNKAILWSEY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcctccggggcgccgggctcccgagctggaagcgccacatcgcggaggag
ctgcggcggcgggaccggctccagaggcaggccttcgaggagatcatcgcccagtataat
aagttgctggagaaatcagatcttcagtcggtgttggctgataaattacaagcagaaaaa
tatgatttgcaaggaaggcacgagatcagtccaggacatgatggcatgtggaatgatgct
cagctacaagaaatggcccagctgaggattaaacatcaagaagaattaactgaattacac
aagaaacgtggggagttagctcagtcggtgatcgacttgaataaccagatgcagcagaag
gaccgggaaatgcagatgaatgaagcaaaaattgctgaatgtttgcaaaaaattagcgag
ctggaaacagagtgccaagaacttcgaaataagctgcaggacctcgaaagagccaaccag
acactcaaggatgaatacgatgccctacagatcacctttactgccttagaagagaaactg
cggaagaccacggaggacaaccaagagctggtcactcgctggatggccgagaaagcccag
gaggccaaccgcctcaacgcagaaaacgagaaggactcccggcgccgccaggcccggctg
cagaaggagcttgcggaagccgccaaggagccattgcccgtagaaccggatgatgacata
gaagtgcttgtggatgaagcttcagatgcggctgaggagacgtcgcccattcgagcaatc
agccggacagccactaagcgactctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacaccacccttcttctgatgctgcc
aggaggcgctctgtctcctccctgcctgttcctcaggataacccagatgctcatcctact
tctaataaagaagtgcgggtccccacgactgcagtttatgtctttgacgcccatgacgga
gaagtgaacgccgtgcagttcagccctggctccaggttactcgccacaggaggcatggat
cggagagttaagctttgggaagtgtttggagataagtgtgaggcgaaaggctccctttct
ggcagtaatgcgggaatcaccagcattgaatttgacagtgctggatcttaccttttggca
tcttcaaatgattttgccagcagaatctggaccgtggacgataaccggttacggcacacg
ctcacggggcacagtgggaaagtcctgtctgccaagttcctgctggacaacgcccggatt
gtttcgggaagtcacgaccggacgctcaaactctgggatctgcgcagtaaagtctgtata
aaaacggtttttgctggatccagttgcaatgatatcgtctgcacagaacagtgtgtaatg
agtggacattttgacaagaaaatccgtttctgggacatacgatctgaaagtataatccgg
gaattggaactcttggggaagatcacagcccttgacttgaatccggagagaacagatctc
ttaagctgctcccgagatgatctcctgaaaattattgacctacgagttaatgctgtcaaa
cagaccttcagtgctccaggattcaagtgtggctctgattggacccgagtcgtgttcagt
cctgatggcagctacatagcagctggctccgcagaagggtctctctacatctggaatgtg
ctcacaggcaaagtggaaaaggtcctttcaaaacagcacagttcttcgattaatgcggtg
gcgtggtcgccttctggcactcaggtggttagcgtggacaaaggaaacaaagctatcctg
tggtctgagtattga
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