Sarcophilus harrisii (Tasmanian devil): 100915948
Help
Entry
100915948 CDS
T02286
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100915948 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100915948 (PHF1)
03036 Chromosome and associated proteins [BR:
shr03036
]
100915948 (PHF1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100915948 (PHF1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100915948 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
Prok-RING_1
Chromo
DUF4537
ASH2L-like_WH
RH_dom
PHD_2
Motif
Other DBs
NCBI-GeneID:
100915948
NCBI-ProteinID:
XP_031820955
Ensembl:
ENSSHAG00000001957
LinkDB
All DBs
Position
4:complement(284012117..284018072)
Genome browser
AA seq
567 aa
AA seq
DB search
MAQPSRLSRSAAPQPWETTPPAPSPGTRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSESVVPGNRLVSCEKCRHAYHQDCHI
PRAPAPGEGDGPSPWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAG
HLSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRG
GPESVKRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKG
ERSSQLLSALNSHKDRFISGKEIKKRKCLFGLHARAPPPVESPTGDGAHTSFPSGQGPGV
GVSCPLGKRQRLEPRKKKSPKGKEEELGEPQESRHRPEPREQRERARLRRALQASVSPPP
PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTPGDGEPPDRSPLDLQVA
GFPSDSPRSVPHSTSSSSPDPSPVPSRRSVPQSPSPLCRGLSPGASVGTRVGAGYLSRGD
PVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccctcccggctgagccgatctgctgccccacaaccctgggaaaccactccc
ccagccccttccccaggtaccagaccacggctttgggaggggcaagatgttctggccaga
tggactgatggactgctatacctgggaactatcaagaaggtggatagtgctcgagaggtg
tgtctagtccaatttgaagatgattcccaatttttggttctatggaaagacattagtcct
gctgccctccctggagaagaactcttgtgctgtgtctgtcgatctgaatccgttgtccct
gggaaccggttggtcagctgtgagaaatgtagacatgcatatcaccaggattgccacatt
ccaagagccccagccccaggagaaggcgacggcccatctccttgggtctgcagacagtgt
gtctttgcaattgccaccaagaggggaggtgccctgaagaagggtccttatgcacgggca
atgctgggcatgaagttgtctctaccgtatgggctgaaagggctggactgggatgcagga
catctgagcaaccggcaacagagctactgttactgcgggggtcctggggagtggaatcta
aagatgctacaatgtcggagttgcctccagtggtttcatgaggcttgcactcaatgtcta
agcaaacctctcttatatggggacaggttttatgagtttgagtgttgtgtctgcagaggg
ggacctgaaagtgtcaagagacttcagcttcgatgggtggatgttgcacatcttgtcctc
tatcaccttagtgtttgctgtaaaaagaaatattttgactttgaccgtgagatcctgcca
ttcacttcagagaactgggacagcttactcctgggggagctctcagatacccctaaggga
gagcgttcctcccaacttctctctgctctaaacagccacaaagaccggtttatctctggg
aaagagataaaaaaacgaaaatgtctatttgggcttcatgctcgggctcctccccctgtg
gaatcccctactggagatggagcacataccagcttcccttcagggcagggcccgggggtg
ggtgtctcatgccccctggggaagcgtcagcgactggagcctcggaagaagaaatcacca
aaggggaaggaagaagaattgggggaaccccaggagagccggcatcgaccagagcccagg
gagcagagggagcgggctcgtcttcggagggcgctgcaggcttcagtgtctccacctcct
cccagccctaaccagagctaccagggcagcagtggctacaatttccggcccacagatgcc
cgctgcctgcccagcagccccatccggatgttcgcctccttccatccctcggccagcact
gcaggaacccctggggatggagagcccccagacaggtcacccttggaccttcaagttgct
ggttttccttcagattccccaaggagtgttccccactcaacatcatcttcgtccccagac
ccctcccctgttccctcccgaagatcagttccccagagtccttcccctctatgtcgtggc
ttatctcctggagctagtgtgggtactcgggtaggggctgggtacctgtctcggggagac
cctgtccgtgtgcttgcccggagggttcgaccagatggctcagtgcagtaccttgtagag
tggggtgggggaggtatcttctga
DBGET
integrated database retrieval system
