Sarcophilus harrisii (Tasmanian devil): 100916999 Help Entry 100916999         CDS       T02286                                  Symbol COL9A1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr04151   PI3K-Akt signaling pathway shr04510   Focal adhesion shr04512   ECM-receptor interaction shr04820   Cytoskeleton in muscle cells shr04974   Protein digestion and absorption shr05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:shr00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100916999 (COL9A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100916999 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100916999 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100916999 (COL9A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     100916999 (COL9A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     100916999 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:shr00535]     100916999 (COL9A1) Proteoglycans [BR:shr00535]  Extracellular matrix (ECM) proteoglycans   Others    100916999 (COL9A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  100916999 NCBI-ProteinID:  XP_031824467 Ensembl:  ENSSHAG00000012247 LinkDB All DBs Position 4:239799202..239923612 Genome browser AA seq 949 aa AA seqDB search MIELDLFPLPGSSPHFTKYILLQSCAPTPSLFFYRKIPFIFFICCLLGPWASATVQRYRR FPISLTPNPENDLCPQVRIGQDDLPGFDLISQFQVDKAASRGAIQKVTGSTSLQVAYKLG NNVDFRIPTRHLYPNGLPEEYSFLTTFRMTGNTLKKNWSIWQIQNSMGKEQVGMKINGQT QSLAFSYKGVDGSLQTAAFSNTPILFDSQWHKVMIGVERTSVTLFIDCKRIESLPIKPRG KIDVDGFAVLGKLIDNPQVSVPFELQWLLIHCDPLRPRRETCHELPVRPSLINGERGPPG PQGPPGPPGPPGVPGIDGIDGDRGPKGSPGPPGPSGDPGKPGAPGLPGTPGADGLTGPDG SPGAVGPRGQKGEPGVPGSRGFPGRGIPGPPGPPGASGLPGELGRVGPSGDPGRRGPPGP PGPPGPSGTIGFHDGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD QGELGEVGAQGPPGPQGLRGITGIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGPLGE TGPKGDRGVQGPRGINGLPGPKGENGLPGVDGRDGIPGMPGSKGEPGKPGPPGDVGRQGL PGLPGSPGAKGVAGEKGNTGAPGVPGVMGNSGKPGQQGPQGEVGPRGPRGLPGSRGELGP SGPPGSPGKLGPSGSPGLPGLPGPPGLPGLKGDRGSVGEPGPKGEQGRAGEEGEAGGKGE LGDIGLPGPKGSVGNPGEPGSRGPEGSRGLPGVEGSRGPPGPRGMQGERGATGLPGIQGP AGRAPTDQHIKQVCLRVMQENLALMAASLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQ MGPRGLPGLKGPPGDLGLRGPKGDLGERGERGPPGRGPKGLPGSIGLPGDPGPASYGKEG RDGERGPPGPAGIPGVPGPPGPAGPPGFCEPASCTVQAGQRAFSKGPDQ NT seq 2850 nt NT seq  +upstreamnt  +downstreamnt atgatagaattggacttattccctctgccaggcagtagccctcatttcaccaaatacatt ctgcttcagtcttgtgccccaactccctctctattcttttataggaaaattccatttatc ttcttcatatgctgtttgctgggaccttgggcatctgcaactgttcagcgttatcgaaga ttccccatctccttgactcccaatcctgaaaatgacctttgtccacaagtccggattggc caggatgacttaccaggatttgacttaatttctcagttccaagtagataaagcagcatct agaggagctattcagaaggttacaggctcaacatcattacaagtggcttataaattagga aataatgtagacttcaggatcccaaccagacatttgtatcccaatggactacctgaagaa tattcctttttaacaacttttcggatgactggaaacactctgaaaaagaactggagcatc tggcagatacagaattccatggggaaagagcaagttggcatgaagattaatggccaaact caatcccttgcattttcctataaaggagtggatggtagtcttcaaactgcagctttttca aatactcctattttgtttgattcccaatggcataaagttatgattggtgtggaaaggaca agtgtcaccctctttattgactgcaaaaggattgaatccttacccataaagccaaggggc aagattgacgtggatggttttgctgttctaggaaaactcatagataatcctcaggtttct gttccgtttgaactccagtggttgctgattcattgtgaccctctgagacccagaagagaa acttgccatgaacttccagtccggccaagcctgatcaatggggagagaggtcccccgggt ccccaagggcctcctggtcctcccggtcccccaggagttccaggcatcgatggtattgac ggagatcgaggtccaaagggttccccaggtcccccgggtcccagtggagacccaggaaaa ccaggagctccgggtttgccgggtacaccaggtgcagatggcttgacaggacctgatgga tcacctggtgcagttggtccaagaggacaaaaaggagagcctggagtcccaggatcacgt ggatttccaggtcgtggtattcctggaccaccgggacctcctggtgcatcaggacttcct ggagaacttggacgtgtgggaccatctggtgatcctggaagaagaggaccacctggccct ccaggtcctccaggaccaagtggaacaattggatttcatgatggagatccactgtgtccc aattcctgtccacctggtcgttcgggatatccaggtctaccaggcatgaggggtcacaaa ggagcaaagggagaaattggggaaccaggaagacaaggtcataagggagaagaaggtgat cagggagaacttggagaagtgggagctcaaggaccaccgggtcctcaaggcttaagagga ataaccggtatagttggggccaaaggggacaaaggagctcgtggccttgatggtgaacct gggccccagggacttcctggtgcacctggtgatcaagggcagagaggaccactaggagaa acaggccctaagggtgacagaggtgttcagggtcctagagggataaatggccttccaggt cccaaaggagagaatggtttgccaggagtagatggtcgagatggaatccctggaatgcct ggatcaaagggtgaacctgggaagcctggacctcctggtgatgtaggaaggcaggggctt cctggtttacctggaagtcctggtgcaaaaggtgttgctggtgaaaagggtaatacaggt gctcctggggtacctggtgttatgggaaattcaggcaaaccgggtcaacagggacctcaa ggggaagttggaccaagaggaccacgggggctaccaggtagcagaggagaattaggaccc agtggtcctccaggctcaccaggtaaactgggtccctctggcagcccaggccttccaggt ctgcctggtccccctggactccctggattgaaaggcgacaggggttcagttggtgagcct ggtccaaaaggagaacaaggtcgtgctggtgaagaaggtgaagcaggaggaaaaggagaa ctaggagatataggattgccaggcccaaagggatctgtgggtaatcctggagagcctggg tcaagagggcctgaagggtcacgggggttgccaggagtggaaggatctagaggccctcct ggaccacgaggcatgcaaggtgaacgaggtgcaacaggtcttcctggtatccagggccca gcaggtagagcaccaacggatcagcatattaagcaagtttgcctaagagttatgcaagag aatttagctttaatggctgctagcttgaagagacctgactcaggtgcttctgggttacca ggaagacctggaccaccaggtccacctgggcctccaggagagaatggttttccaggccag atgggaccccgtggcctcccaggtcttaaaggtcctcctggcgatcttggtttgagaggt cctaagggtgacttaggtgaaaggggtgagagaggacctcctggaagaggacccaaaggc ttaccaggatccattggtcttccaggtgatccaggtccagcaagctatggaaaagaggga cgggatggagagcggggccctccaggtcctgcaggaattcctggagtccctggccctcca ggccctgctggtccccctggtttctgtgagccagcctcctgtacagtccaggctggccag cgtgctttcagcaaaggtccagatcagtga

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