Sarcophilus harrisii (Tasmanian devil): 100918276
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Entry
100918276 CDS
T02286
Symbol
UBE4A
Name
(RefSeq) ubiquitin conjugation factor E4 A isoform X2
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100918276 (UBE4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100918276 (UBE4A)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100918276 (UBE4A)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
U-box type E3
100918276 (UBE4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
100918276
NCBI-ProteinID:
XP_003764198
Ensembl:
ENSSHAG00000013216
LinkDB
All DBs
Position
3:358149303..358186051
Genome browser
AA seq
1068 aa
AA seq
DB search
MTDQDNNNNISSNPFAALFSSLADAKHFAAIQKEQLKQQSDEPSASPDDSDNSVSESLDD
CDYSVSEISRSFRSQQEICEQLNINHMIQRIFLITLDNSDPSMKGGNGIPSRCVYLEELA
GDLDEQDWLDMDNIEQALFTRLLLQDPSNHLINMTCSTTLNLSADRDAGEKHILCYLYSC
FLRAKEEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVDQNVYDQLVDLLLEAIRGA
HFEDVTEFLEEVIEALTVDQEVRTFQEVMVPVFDILLSRIKDLDLCQILLYTYLDMLLYF
TRQKDIAKVFVEYIQPKDPSNGQMYQKTLLGVILSISCLLKTPGVVENHGYFLNPSRSSP
QEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPDTKHWILSWLGNCLYANTGRTKIWANQ
MPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPRLLTFNPTYCALKELNDEERRIKNV
HMKGLDKETCLIPKESDQELEFAQNYNLVTENLVLTQYTLHVGFHRLHDQMVKINQSLHR
LQVAWREAQQSASPTADSLREQFERLMTVYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQL
AIGNQGTEPIELTFPLPDQYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEQVL
HFVTIFTGSVERMKNPHLRAKLAEVLEAVMPHLDQAPNPLVSSVFHRKRVFCSYPYAAQL
AEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGTDAYRESIKGLADYASENLEA
MNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIERDQGEWDNLSPEARREKEASLQM
FGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKV
KDFSEFDFKPQQLVSDICNIYLNLGDEENFCATVPKDGRSYSPMLFAQTVRVLKKINKPG
NMIVAFSNLAEKIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVMLPSSRVTVDRST
IARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKLQKEQLE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaggacaataacaacaacatctccagtaacccctttgctgctctcttcagt
tccctggccgatgccaagcactttgcagcgatccagaaggaacagctgaagcagcaatct
gatgaaccctcagctagcccagatgactcggataacagtgtgtcggaaagtttggatgac
tgtgactactctgtctctgagattagccgatcattccgttcccagcaggagatatgtgag
cagctcaacatcaatcacatgatccaaaggattttcctaatcaccctggacaacagtgac
ccaagcatgaaaggtggaaatgggatccccagccgctgtgtgtatttggaggaactggca
ggagacttggacgaacaagactggcttgatatggacaacattgagcaggccctctttacc
cgattgctgcttcaggatccaagcaaccacttgattaacatgacctgttccacaacatta
aacctctctgcagatcgagatgcaggggaaaagcacattctttgctacctttattcctgt
ttcctaagagcaaaagaggagattaccaaagtaccagaaaacctgttgccctttgctgtg
agatgtagaaacttaactgtatctaatacccgaactgtcctcctcaccccagagatttat
gttgaccagaatgtctatgatcagctagtagaccttttattggaagcaattcgaggggct
cattttgaagatgtaactgagttccttgaagaggtcattgaagccttgacagtggatcag
gaagttcggacatttcaagaagtcatggttccagtatttgacattttgttgagcagaata
aaagacttggatctctgtcaaattttgctatacacatatctagatatgcttctctatttc
acgaggcagaaggatattgcaaaagtttttgtagagtacatacagcccaaggaccccagc
aatggacagatgtaccagaagactttactgggagtaattctgagtatttcctgcttgtta
aagactccaggggtagtagagaaccacggctacttcttgaatccatcccgatccagtcct
caggagatcaaagtgcaggaggccaacatccatcagttcatggctcagttccatgaaaag
atttaccagatgctgaagaacttactccagctctctccagacaccaagcattggatctta
tcctggcttggcaactgcctgtatgccaacacaggccgcaccaagatctgggccaatcaa
atgccagagatcttcttccagatgtatgcctcagatgccttcttcctgaatctgggtgct
gccctcctgaagctatgccagccattttgcaaacctaaatccccaaggctgctcaccttt
aaccctacctattgtgccctcaaagagttgaatgatgaagagaggaggataaagaatgta
catatgaaaggtttggataaagaaacctgtttgatccctaaagagagtgaccaggagttg
gagtttgcccaaaactataacctggtaactgagaacctggtcctgacacagtatactttg
cacgtgggatttcacaggttgcatgaccagatggtaaaaatcaaccaaagcttgcatcgg
ctgcaggtggcctggcgtgaggctcagcaaagtgccagccccacagcggacagcctccga
gagcagtttgagcgcttgatgactgtctatctctccaccaagactgccatgacagagccg
cagatgctacaaaactgcctcaatttgcaggtgtccatggctgttcttctggttcagcta
gccattggcaaccaaggcacagagccaatagagctgactttccctttgccagatcagtac
agttctttggcttacgtgccagaattctttgcggataacctgggagattttcttattttc
ttacggcgatttgctgacgacatcctggagacatcagctgattcattggagcaagttctt
cattttgtcaccatttttactgggagcgtagagagaatgaagaacccccatctaagggcc
aaactggcagaggttctagaagcagtcatgccgcacctggaccaagccccgaatcccctg
gtctctagcgtgttccaccgtaagcgagtgttctgcagctacccctatgcagctcagctt
gctgaggcactcatcaaagtctttgtagacattgagtttacaggagacccccatcagttt
gagcaaaaatttaactaccgccgtcccatgtatcctatcttaaagtacatgtggggaaca
gatgcctacagagaaagcataaagggtctagctgattatgcctctgaaaatttggaggcc
atgaatccccctctctttctccgcttccttaacctattaatgaatgatgctatcttccta
ttggatgaagccatacagtacttaagcaagataaaaattcagcagattgaaagggaccag
ggtgaatgggacaatttgtctccagaagcccgtcgagaaaaggaggctagtctgcaaatg
tttgggcagctggctcgattccacaacatcatgtctaatgaaaccattggtaccttggct
tttctgacatcagagatcaagtccctctttgtacaccccttcctggctgaacgaatcatc
tccatgctaaactactttctacagcatctggttggtcctaagatgggagccttaaaagtc
aaggatttcagcgaatttgacttcaagcctcagcagcttgtttcagacatctgcaacatc
tacttaaaccttggcgacgaggagaatttctgtgctactgtgcccaaggatgggcgatct
tattccccaatgctctttgcccagacagtccgagtcctgaagaaaataaacaagcctgga
aatatgattgtggctttcagcaacctggcagaaaagatcaagtctcttgcagatcttcaa
caacaggaagaagagacctatgcagatgcctgtgatgagtttctagatcccatcatgagc
acactgatgtcagaccctgtgatgctgccatcttccagagtcactgtggatagatccaca
atagccaggcatctactcagtgatcagactgatccctttaaccgtagccccctaactatg
gaccagatccggccaaacacagaactgaaagagaaaatccaacggtggctcgcagagagg
aaattacagaaggaacaacttgagtaa
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