Sarcophilus harrisii (Tasmanian devil): 100919997
Help
Entry
100919997 CDS
T02286
Symbol
PUM2
Name
(RefSeq) pumilio homolog 2 isoform X4
KO
K17943
pumilio RNA-binding family
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100919997 (PUM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
100919997
NCBI-ProteinID:
XP_023351084
Ensembl:
ENSSHAG00000002778
LinkDB
All DBs
Position
2:2633923..2713599
Genome browser
AA seq
1028 aa
AA seq
DB search
MSQPIMVQRRPGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGAF
GPRDAETDGPEKGDEKGKASPFEEDTDRDLKQGDEEDSKIKGRGLPNGMDADCKDFNRTP
GSRQASPTEVAERLGPNSNPPEGLGPLPNPAVNKPLVEEFPSPEAQTLDAMEQVGLDSLQ
FDYPGNQVPMDSSGAAVGLFDYSSQPQQLFQRTGALTVQQLTAAQQQQYALAAAQQPHIA
GVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAATLAGPAVVPPQYYGVPWGVYPANL
FQQQAAAAATSAANQQAASQAPPPGQQQVLRAGASQRPLTPNQTQQGQPADSLAAAAAAA
AAAAAAAAANPALAFGQGLATGMPGYQVLAPTAYYDQTGALVMGPGARTGLGAPVRLVAS
TPVLISSAAAQAAAAASAGGTASSLTGATNGLFRPLGTQPPPPPPPPPQQPPPQPNTNLQ
SSSFYGSSSLTSTSQSSSLFSHGPGQPGGTSLGFGSSSSLGAALGSALSGFGSSVGSSAS
SSATRRDSLSTSSELYKRSSSSLAPPVGPPFYNSLGFSSSPSPIGMPLPSQTPGHCLTPP
PSLSSHGSSSSLHLGGLANGSGRYISAAPGAEAKHRSASSTCSLFSSSSQLFPPSRLRYS
RADIMPSGRSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPTERQM
VFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLSLTTRIRGHVLPLALQMYGCRVIQK
ALESISPDQQVINDMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVF
VLSTHPYGCRVIQRILEHCTVEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDK
SKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKD
QYANYVVQKMIDMAEPGQRKVLMHKIRPHVTTLRKYTYGKHILVKLEKYYLRNSPELGPV
GGPPNGVL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacctattatggtacagagaagacctggacagggttttcatggaaacagtgaa
gtaaatgcaattctgtctcctcgatccgaaagtggaggccttggcgtgagcatggtagaa
tatgtattaagttcttctcctgcagataaattggattctcgatttaggaaaggagctttt
ggccctagagatgctgaaacagatggacctgagaaaggagatgagaaaggcaaggcttct
ccgtttgaggaggacacagacagagatcttaaacaaggagatgaggaggattctaaaata
aaaggcagagggttgccaaatggaatggatgccgattgcaaagattttaatcgtactccg
ggaagccgccaagcttctcccacagaagtagctgagcgcctgggccccaattcaaatcct
cctgaaggactgggtcctctccctaaccctgcagttaataagccccttgtggaagagttc
cccagccccgaagcccagactttggatgccatggagcaagtgggcctggattctttgcag
ttcgactatcctggaaaccaggtgccgatggactcttcaggggctgcagtcggcctcttt
gactacagctctcagccgcagcagctctttcagaggaccggggcgctaactgtccagcag
ctaacggccgcccagcagcagcagtacgcgttagctgcagcccaacagccacacatcgcc
ggcgtcttctctgcaggcctcgctccagccgcttttgtgccaaacccatacattatcagt
gccgccccccccggcactgacccctacactgcggccggcctggccgccacactagcaggt
cctgcagtggtcccgccccagtattacggcgtgccctggggggtgtatccagccaattta
tttcagcagcaagctgcagctgctgccaccagcgcagcaaatcagcaagccgcatcccag
gcgccacctccgggacagcagcaggttctccgggctggagccagtcagcgccctctcact
cccaaccagactcagcaggggcagccagcagattcccttgctgctgctgccgccgctgcc
gctgccgctgctgccgctgccgccgccaaccctgctctggcttttggtcagggtcttgct
actggcatgccaggctaccaagtccttgccccgaccgcctactatgaccagaccggtgcc
ttagtgatgggccctggagcaagaacgggcctgggcgccccagtgcgccttgtggcctcc
acccctgtcctcattagttcagcagcagcacaggctgcagccgcagcttctgctggaggg
actgccagcagtctgacaggagccaccaatggcctattccggcctctcggcacccagcca
ccaccgccaccgccgccaccgccacagcagcctcctccccagcccaacacaaatctccag
tccagttcattttatgggagcagctctctgaccagcacctcccagagcagctccttgttt
tctcatgggccgggccagcctggaggcacatctctgggtttcgggagcagcagctccttg
ggggcggctctcggctctgccctcagcgggttcggctcttctgttggcagttctgcaagt
agtagtgccacaaggagagattctctgtctactagttctgaattgtacaaaagatctagt
agcagcctagctcctcccgtagggccgccattttacaatagtctgggattttcctcctct
ccaagcccaataggcatgcctctgccaagccaaacgccaggacattgtcttacgccaccg
ccatcactctcatcacatggatcttcatccagtttgcatttaggaggcctggccaatggc
agtgggcgttatatctcggcagctcctggagcagaagccaagcatcgcagcgcgtccagc
acgtgcagcctcttcagctctagcagccagctgttccctccctcccggctgcgctacagc
cgggccgacattatgccctccggccgcagtcgcttattagaagatttccggaacaaccgt
ttcccgaaccttcagctcagagacctcatggggcacatagtagagttttcccaagaccag
catggctccaggttcatacagcagaagctagaacgagctacgcccactgagcgccagatg
gtgtttaatgagattctgcaagcagcctatcaactgatgacggatgtctttggcaactat
gtcattcagaagttttttgagtttgggaacctggatcagaagctttccctgactacccgg
atccgaggccacgtcctgccattggccttacagatgtatggctgccgggtcattcagaaa
gcattagagtctatttcccctgaccagcaggtaattaatgacatggtcaaggagctggat
ggccacgtcctcaaatgcgtgaaagatcagaacgggaaccacgtggttcagaagtgcatc
gagtgcgtgcagcctcaggctctgcagttcatcattgatgcttttaaaggacaggtgttc
gtgctttccacccacccgtatggctgccgagtgatccagcgcatcctggagcactgcaca
gtcgagcagaccctgcccgtcttggaagagctgcaccagcacacggagcagctggtccaa
gatcagtatggaaactatgttattcagcatgttctggaacatggccgccctgacgacaag
agcaaaattgtttctgaaatccgagggaaggtcctgaccctcagccagcacaaatttgcc
agcaacgtagtggagaagtgtgtgtctcacgcgtcccgcgccgagcgagccctgctcatc
gacgagatctgctgccagaacgacggtcctcacagtgccttatacaccatgatgaaggac
cagtacgccaactacgtcgtccagaagatgatcgacatggcggaacccgggcaacgcaag
gtcctcatgcacaagatccggcctcacgtcaccactctgcgcaagtatacgtacgggaaa
cacatattggtcaagctggaaaagtactacctgagaaacagcccggagctggggcccgtc
gggggccccccgaacggcgtgctgtag
DBGET
integrated database retrieval system