KEGG   Sarcophilus harrisii (Tasmanian devil): 100920428
Entry
100920428         CDS       T02286                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151  PI3K-Akt signaling pathway
shr04510  Focal adhesion
shr04512  ECM-receptor interaction
shr04820  Cytoskeleton in muscle cells
shr04974  Protein digestion and absorption
shr05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100920428 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100920428 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100920428 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100920428 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100920428 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100920428 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:shr00535]
    100920428 (COL9A3)
Proteoglycans [BR:shr00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   100920428 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100920428
NCBI-ProteinID: XP_023350225
Ensembl: ENSSHAG00000010063
UniProt: A0A7N4V3J0
LinkDB
Position
2:242845625..242899230
AA seq 680 aa
MAATSVLVLLILSQLVATSLTQKIGPRGPAGPQGPPGPPGKDGIDGEAGPPGLPGPPGPK
GAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGSPGERGNLGPPGPPGLGGKGLPGPPG
EAGLSGLPGGNGVRGPPGPSGLPGLPGPPGPPGPPGHPGVLPDGAGDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGTIGLQGPRGLRGLTGALGPPG
DRGPIGFRGPPGVPGPPGKVGDRGERGPEGFRGPKGDLGKPGPKGLPGVAGPIGEPGMPG
KDGRDGIPGYDGEKGEAARLGAPGEKGPNGLPGLPGRAGAKGEKGELGKQGELGEAGPSG
EPGMPGDVGIPGERGETGHRGSSGALGLQGPPGPPGVRGFQGRKGSIGDPGLPGPQGLRG
GVGDRGPGGAMGLKGNQGIAGADGLPGDKGELGPNGPVGQKGESGSRGELGPKGIQGPNG
TTGVQGLPGHPGPAGFQGVQGVPGITGKPGVPGKEASEQHIRELCGGMINEQIAQLAANL
RKPLTPGSIGRPGPAGPPGPPGPAGSIGHPGPRGPPGYRGPTGELGDPGPRGNQGDRGDK
GAIGIGIDGPDGDQGPQGPQGVPGISKDGRDGAHGEPGFPGDPGIPGAIGVQGTPGICDT
SACQGAVIGGGGEKSGPRSS
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggctgcaacctctgtcttggtgctgcttattctcagtcaacttgtagctacctcctta
actcagaaaataggacctcggggccctgctggacctcaaggccctccgggacctcctgga
aaagacggcatagatggtgaagctggtcctccaggtcttcctggccctccgggccccaaa
ggagccccagggaaacctgggaagcctggagaagctgggctgcctggcctgccaggtgta
gatggtctgacaggtcaggatggaccccctggtcctaaaggctcacctggagaaaggggt
aatcttggacctccaggacctcctgggctgggaggcaaaggacttcctggacctccaggt
gaggctggactgagtggcctcccaggaggaaatggagtccgtggaccccctggaccatct
ggactcccaggcctgcctggtcccccaggtcccccgggacctcccggacacccaggagtt
cttcctgatggtgctggcgatcttcagtgtcctgctatctgcccacctggaccacctgga
cccccaggaatgccaggattcaagggacccactggttacaaaggggagcaaggagaagta
ggaaaagatggagagaagggtgatcctggtcccccaggacctgctggtatccctggaact
attggtctacagggccctagaggtttaagaggactgacaggtgcactggggccacctgga
gatcgtggaccaattggcttccgaggacctccaggagttccaggaccacctgggaaagtt
ggagatcgaggagagaggggaccagagggattccgggggcccaagggtgaccttggcaag
cctggtcccaaaggattacctggagtagctggacctattggagagcctggtatgcctggc
aaagatggcagagatggaatccctggatatgatggtgagaagggtgaagcagctcggctt
ggtgctcctggggagaagggtcccaacggactccctgggctgcctggacgagctggggcc
aagggcgagaagggagagctgggcaaacaaggagagctaggtgaagctggcccttccgga
gagcctggtatgcctggagatgtcggaattcctggggagagaggagaaactggacacagg
ggatcttcaggggcacttggtctacagggcccaccaggaccccctggagtaagaggcttt
cagggtcggaagggcagcattggagatcctggcttacctggcccccagggccttagaggt
ggtgttggagaccggggcccaggaggagctatgggtcttaaaggaaaccagggtattgct
ggagctgatggtcttcctggggataaaggagaactgggtcctaatggtcctgttggacag
aaaggagagtcaggtagtagaggtgagctgggccctaaaggtattcagggtcctaatggt
actactggtgttcaagggctcccaggacatcctggtccagcagggttccagggagtacaa
ggtgtccccggaattactggaaaacctggagttcctggtaaagaagccagtgaacaacat
ataagggaactatgtggaggaatgattaatgaacaaattgcacagttagctgctaactta
aggaagcctctaactcctggatcaattggccgacctggtccagctggtcctccaggccct
ccaggtccagcaggatctattggccatcctggtcctcgtgggccacctgggtatcgaggt
ccaactggagagttaggagatccaggacccagaggtaatcagggtgacagaggagacaaa
ggagctattggcataggcattgatgggcctgatggagatcaaggacctcaaggacctcaa
ggcgttcctggaattagtaaagatggtcgagatggtgcccatggtgaacctggttttcca
ggtgatcctggcattcctggtgcaattggtgttcagggaactccagggatttgtgatacc
tcagcctgtcaaggagctgttataggaggaggaggggaaaaatctggccctagaagctca
taa

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