Sarcophilus harrisii (Tasmanian devil): 100920428
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Entry
100920428 CDS
T02286
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151
PI3K-Akt signaling pathway
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr04820
Cytoskeleton in muscle cells
shr04974
Protein digestion and absorption
shr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100920428 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100920428 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100920428 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100920428 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100920428 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100920428 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100920428 (COL9A3)
Proteoglycans [BR:
shr00535
]
Extracellular matrix (ECM) proteoglycans
Others
100920428 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100920428
NCBI-ProteinID:
XP_023350225
Ensembl:
ENSSHAG00000010063
UniProt:
A0A7N4V3J0
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Position
2:242845625..242899230
Genome browser
AA seq
680 aa
AA seq
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MAATSVLVLLILSQLVATSLTQKIGPRGPAGPQGPPGPPGKDGIDGEAGPPGLPGPPGPK
GAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGSPGERGNLGPPGPPGLGGKGLPGPPG
EAGLSGLPGGNGVRGPPGPSGLPGLPGPPGPPGPPGHPGVLPDGAGDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGTIGLQGPRGLRGLTGALGPPG
DRGPIGFRGPPGVPGPPGKVGDRGERGPEGFRGPKGDLGKPGPKGLPGVAGPIGEPGMPG
KDGRDGIPGYDGEKGEAARLGAPGEKGPNGLPGLPGRAGAKGEKGELGKQGELGEAGPSG
EPGMPGDVGIPGERGETGHRGSSGALGLQGPPGPPGVRGFQGRKGSIGDPGLPGPQGLRG
GVGDRGPGGAMGLKGNQGIAGADGLPGDKGELGPNGPVGQKGESGSRGELGPKGIQGPNG
TTGVQGLPGHPGPAGFQGVQGVPGITGKPGVPGKEASEQHIRELCGGMINEQIAQLAANL
RKPLTPGSIGRPGPAGPPGPPGPAGSIGHPGPRGPPGYRGPTGELGDPGPRGNQGDRGDK
GAIGIGIDGPDGDQGPQGPQGVPGISKDGRDGAHGEPGFPGDPGIPGAIGVQGTPGICDT
SACQGAVIGGGGEKSGPRSS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacctctgtcttggtgctgcttattctcagtcaacttgtagctacctcctta
actcagaaaataggacctcggggccctgctggacctcaaggccctccgggacctcctgga
aaagacggcatagatggtgaagctggtcctccaggtcttcctggccctccgggccccaaa
ggagccccagggaaacctgggaagcctggagaagctgggctgcctggcctgccaggtgta
gatggtctgacaggtcaggatggaccccctggtcctaaaggctcacctggagaaaggggt
aatcttggacctccaggacctcctgggctgggaggcaaaggacttcctggacctccaggt
gaggctggactgagtggcctcccaggaggaaatggagtccgtggaccccctggaccatct
ggactcccaggcctgcctggtcccccaggtcccccgggacctcccggacacccaggagtt
cttcctgatggtgctggcgatcttcagtgtcctgctatctgcccacctggaccacctgga
cccccaggaatgccaggattcaagggacccactggttacaaaggggagcaaggagaagta
ggaaaagatggagagaagggtgatcctggtcccccaggacctgctggtatccctggaact
attggtctacagggccctagaggtttaagaggactgacaggtgcactggggccacctgga
gatcgtggaccaattggcttccgaggacctccaggagttccaggaccacctgggaaagtt
ggagatcgaggagagaggggaccagagggattccgggggcccaagggtgaccttggcaag
cctggtcccaaaggattacctggagtagctggacctattggagagcctggtatgcctggc
aaagatggcagagatggaatccctggatatgatggtgagaagggtgaagcagctcggctt
ggtgctcctggggagaagggtcccaacggactccctgggctgcctggacgagctggggcc
aagggcgagaagggagagctgggcaaacaaggagagctaggtgaagctggcccttccgga
gagcctggtatgcctggagatgtcggaattcctggggagagaggagaaactggacacagg
ggatcttcaggggcacttggtctacagggcccaccaggaccccctggagtaagaggcttt
cagggtcggaagggcagcattggagatcctggcttacctggcccccagggccttagaggt
ggtgttggagaccggggcccaggaggagctatgggtcttaaaggaaaccagggtattgct
ggagctgatggtcttcctggggataaaggagaactgggtcctaatggtcctgttggacag
aaaggagagtcaggtagtagaggtgagctgggccctaaaggtattcagggtcctaatggt
actactggtgttcaagggctcccaggacatcctggtccagcagggttccagggagtacaa
ggtgtccccggaattactggaaaacctggagttcctggtaaagaagccagtgaacaacat
ataagggaactatgtggaggaatgattaatgaacaaattgcacagttagctgctaactta
aggaagcctctaactcctggatcaattggccgacctggtccagctggtcctccaggccct
ccaggtccagcaggatctattggccatcctggtcctcgtgggccacctgggtatcgaggt
ccaactggagagttaggagatccaggacccagaggtaatcagggtgacagaggagacaaa
ggagctattggcataggcattgatgggcctgatggagatcaaggacctcaaggacctcaa
ggcgttcctggaattagtaaagatggtcgagatggtgcccatggtgaacctggttttcca
ggtgatcctggcattcctggtgcaattggtgttcagggaactccagggatttgtgatacc
tcagcctgtcaaggagctgttataggaggaggaggggaaaaatctggccctagaagctca
taa
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