Sarcophilus harrisii (Tasmanian devil): 100920582
Help
Entry
100920582 CDS
T02286
Symbol
STX18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04130
SNARE interactions in vesicular transport
shr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100920582 (STX18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100920582 (STX18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100920582 (STX18)
Membrane trafficking [BR:
shr04131
]
SNARE
Syntaxin (Qa)
Stx-rER
100920582 (STX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6279
Motif
Other DBs
NCBI-GeneID:
100920582
NCBI-ProteinID:
XP_031798734
Ensembl:
ENSSHAG00000008946
LinkDB
All DBs
Position
6:2296670..2372357
Genome browser
AA seq
335 aa
AA seq
DB search
MAVDITLLFRASVKTVKTRNKALGVAVGGGGPDGARDELFRRSPRPKGDFSGRAREVISH
IGKLRDFLLEHRKDYINAYSHIMSDYMRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAH
KEVHSQQVKEHRSAVLDFIEDYLKRVCKIYSEQRAIRVKRVVDKKRLSRLEPDQSCKSAE
SSSSEKVSQSSEESEEKSSTEENRDKNVTAAQSNFGLWGDGRGEDELSPEEIQVFEQENQ
RLVGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNE
DIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggacatcacgctcctgttccgggccagcgtgaagacagtgaagacccgcaac
aaggctctgggggtggcggtgggcggcggcggcccggacggggcccgcgatgagctgttc
cgcaggagcccccgccccaaaggcgacttctccggccgcgcccgcgaagtgatttcccat
attgggaagttgagagactttcttctggaacacaggaaagattacattaacgcatatagc
cacattatgtctgactacatgaggatgactgatacagaacgggatcagattgatcaggat
gcccaaatatttatgaggacgtgttcagaagcaattcagcaactacgaacagaagcacac
aaggaggtgcattcccagcaagtcaaggaacacagaagtgcagtcttggatttcattgaa
gattatttaaaaagagtctgtaaaatttattctgagcagagagcgatccgagttaaacgt
gtggtagataaaaaaagattgtcgaggcttgaaccggaccagagctgtaaatctgcagaa
tcctcatcatctgagaaagtctcacagagttcagaagaatcggaagaaaaatcttccacg
gaggaaaaccgagataagaatgtgacagcagctcagtctaactttggcctgtggggagat
ggcagaggagaagatgagttgtccccggaagaaatacaagtgtttgaacaagaaaatcag
agactcgtgggggagatgaacagcttgtttgacgaagtgaggcaaattgagggaaaagtg
gtcgaaatctccagacttcaagagattttcacagaaaaggttttgcaacaggaaactgaa
atcgacagcattcaccagctagttgtgggtgcgacggagaacatcaaggaaggtaacgaa
gacataagggaggcaattaaaaacaacgcaggattccgtgtttggattcttttcttcctt
gtgatgtgttcattctccttgcttttcctggactggtatgatagctag
DBGET
integrated database retrieval system