Sarcophilus harrisii (Tasmanian devil): 100922779
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Entry
100922779 CDS
T02286
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X3
KO
K15623
protein SSXT
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100922779 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100922779 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100922779 (SS18L1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100922779 (SS18L1)
GBAF(ncBAF) complex
100922779 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100922779
NCBI-ProteinID:
XP_003757675
Ensembl:
ENSSHAG00000015339
LinkDB
All DBs
Position
2:240894286..240974463
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGGMPQSGSNQSIHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSMSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGSSMMGQRPMGP
YRPSQQGSSQQYMGQEEYYSEQYSHGQGASEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcctttgcatctgcccgtcctagaggcaaaggggaggtcactcagcaaact
atccaaaagatgctagatgaaaaccatcacttaattcagtgtattatggactaccagagt
aagggcaagactgcagaatgtactcaataccaacaaatactacacagaaatttggtttat
ttggcaacaatagcagactctaaccagaacatgcagtcattgcttcctgccccaccaacg
caaaacatgaatcttgggccaggaggaatgcctcagagtggatccaaccaatctatccat
tcccagagcaatctcagtgacgccattggaacaggcctcccaccatcctctcttatgcag
agtcagattagcaatggtccaaaccatgtgtccatgcagcaatcgggacaaaacacaatg
ccaacaacttctatgagcatgacagtcagcagccatgggacgggaccagggtatagccac
actgtgcctgcttctcaaaatgtgccaatgcagggccaaggatccatagggaattatgta
tctagaaccaatatcaacatgcagtccaacccagtctccatgatgcaccagcaagcagca
acatcccattacaattctgcacaaggtggaagccagcattaccaaggacagtcctctatt
gcaatgatgagtcaaagcaaccaaggaagcagcatgatgggtcagcgaccaatgggtcca
taccgcccttcacagcaaggctcttctcagcagtatatgggacaagaagagtattacagt
gagcaatacagccatggtcaaggcgcatctgagccaatgaaccagcaatattatccagat
ggacatggtgattatgcatatcagcagtcatcttacactgaacagagctatgataggtca
tttgaggattctactcagcattattatgaaggaggaaattctcagtatagccagcagcag
gctggatatcagcagggagctgcccaacaacagacgtattcacagcagcaatacccaaat
caacagagctacccaggacagcaacaaggatacggtcctgcacaaggagcttcatcacag
tattccagctaccaacagggacagggacaacagtatggaagctatagagcttctcaaaca
ggaccatctgcccaacaacagaggccttatggttatgaacagggccagtatgggaattat
cagcaataa
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integrated database retrieval system
