Sarcophilus harrisii (Tasmanian devil): 100926063
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Entry
100926063 CDS
T02286
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
shr04145
Phagosome
shr04612
Antigen processing and presentation
shr05163
Human cytomegalovirus infection
shr05168
Herpes simplex virus 1 infection
shr05169
Epstein-Barr virus infection
shr05170
Human immunodeficiency virus 1 infection
shr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100926063 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100926063 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100926063 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100926063 (TAP2)
05168 Herpes simplex virus 1 infection
100926063 (TAP2)
05163 Human cytomegalovirus infection
100926063 (TAP2)
05169 Epstein-Barr virus infection
100926063 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
100926063 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100926063 (TAP2)
Enzymes [BR:
shr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100926063 (TAP2)
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100926063 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_25
AAA_29
AAA_30
Zeta_toxin
ABC_ATPase
AAA_15
AAA_23
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
100926063
NCBI-ProteinID:
XP_012405702
Ensembl:
ENSSHAG00000001057
UniProt:
G3VDD0
LinkDB
All DBs
Position
4:complement(279109325..279124831)
Genome browser
AA seq
708 aa
AA seq
DB search
MQLSTLGSWALLLLTDLILLWVLQRLLGVLFPPGLLSLWLEGAFRMGVLWELLSLLGGLG
KVGKLLPALCLSTPLFLSLRALVPGVLSAPPVLLASAPWAWRLIAYGGGALGWAVWKVLS
PSEAPHSAQEKEQGPENKAMMWRLLRLSWPDFPFLVAAFFFLAAAVIGEMFIPHYTGRVI
DILGQDFDPDAFATAIFFMCLFSLGSSFSAGCRGGLFTLIFSRINLRIRRLLFSSLLRQD
LSFFQETKTGELNSRLSSDTNLMSRWLPLNANVFLRSLVKVIGLYGFMFSLSPRLTLLSL
LELPFSMVAEKVYNARHQDVLQQIQDAKAEAGQVVREAVGNLKTVRSFGAEGDEVQRYEE
ALEHKRQLEWRRDWERAAYLLLVRGLQLGMQVLMLQCGLRQILAGELTRGGLLSFLLYQG
DVGRSVQNLVYICGDMMSNVGAAEKVFRYLDREPRLAPPGTLAPPLQGLVEFKDVSFAYP
THPTKPVLQRVTFTLHPGTVTALVGPNGAGKSSVAALLQNLYQPTEGQVLLDGEPLFRYQ
HQYLHSQVSVVGQEPVLFSGSVRDNIAYGLDSCEDDEVRAAARAACADGFIANMEHGLDT
AVGEKGSQVSAGQKQCLAIARALVRNPRVLILDEATSALDMECEQELQEKMLQGGRTVLV
IAHRLQTVQAADHILVLDQGQVVEQGTHTGLMAQRGLYHRLVQRHLET
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctctactcttgggtcctgggctcttctcctcctgactgacctgatcctgctt
tgggtgttgcagagacttctgggagtcctattccctccagggctccttagtctctggctg
gaaggagcttttaggatgggggtcctatgggagttgctaagtttacttgggggacttggg
aaggtgggcaaactactgcctgccttgtgtctgagcacccccttgttcctatctctgagg
gctctggttccaggagtcttgagtgctccccctgtgctcctagcctcagcaccctgggcc
tggaggctgatagcttatggaggaggggctctgggctgggctgtgtggaaagtgctgagt
ccttctgaagcccctcactcagcacaggagaaggagcaaggcccagagaacaaagccatg
atgtggaggctgctgagactgtcctggcctgacttccccttccttgttgctgctttcttt
ttcttggctgctgcagtcataggtgagatgttcatcccccactacacgggacgtgtgatt
gacatcctgggccaggactttgaccctgatgcctttgccactgccatcttcttcatgtgc
ctcttctcccttggaagctcattctctgctggctgccgaggaggcctcttcaccctcatc
ttctccagaatcaacctgcgtattcggcgcctcctcttttcctccctgctacgccaggac
ctcagcttcttccaggagaccaagacaggggagttaaactctcgcctgtcttcggacacc
aatttgatgagccgctggctccccttaaatgccaacgtgttccttcggagcctggtaaag
gtcataggactgtatggcttcatgttcagtctctcgcctcgactgactcttctctccctg
cttgagctgcccttctcaatggttgctgagaaggtctacaatgcccgacatcaggatgtg
ctgcagcagatccaggatgcgaaggcagaggctggacaggtcgtgcgggaggcagtggga
aacctgaaaactgtgaggagttttggagcagagggagatgaggttcagcgctatgaggaa
gccttggagcacaagcgccagctggagtggcgccgagactgggagcgggcagcgtatctg
ctcttagtgcggggacttcagctggggatgcaggtgttgatgctgcaatgtgggctaagg
cagattctggcaggggagctcaccagggggggcctcctctccttcctgctctatcagggg
gatgtggggagatctgtgcagaatctggtgtacatctgtggggacatgatgagcaatgtg
ggcgcagcggagaaagttttcagatacctggatcgtgagccacgcttagctcctcctggg
accctggcccctcctcttcagggcctcgtggaattcaaagatgtttcctttgcctatcct
acccacccaaccaagcctgtcctccagagagtgacattcactttgcaccctgggacggtg
acagccctggtagggcccaatggagctgggaagagttcagtggctgcattgctacagaat
ctttatcagcccacagagggccaggtgctgttggatggggaacccttgttccgataccag
caccagtatttgcactcacaggtgtctgtggttggtcaggagcctgtgctgttctcaggg
tctgtgagggacaacattgcctatggcctggatagctgtgaggatgatgaggtgagggcc
gctgccagggcagcctgtgctgatggattcatcgccaatatggaacatggactggataca
gctgtgggggaaaagggaagccaggtgtctgcaggacagaagcaatgtctggccattgct
cgggccctggtgcggaatccccgtgtcctcatcttggatgaggccactagtgccctggac
atggagtgtgagcaggagcttcaggagaagatgctgcagggaggtcggacagtgctggtg
attgcacatcggctgcagacggtgcaggctgctgaccacatcctggtgctggatcaaggg
caggtggtggagcaggggacccacactgggctcatggctcagagaggtctctatcatcgc
ctggtacagcgacatcttgaaacctga
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