Stereum hirsutum: STEHIDRAFT_102071
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Entry
STEHIDRAFT_102071 CDS
T03127
Name
(RefSeq) insert subdomain of RNA polymerase alpha subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
shs
Stereum hirsutum
Pathway
shs03020
RNA polymerase
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STEHIDRAFT_102071
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_102071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_102071
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_102071
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
STEHIDRAFT_102071
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
STEHIDRAFT_102071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
6PF2K
DUF22
Motif
Other DBs
NCBI-GeneID:
18794495
NCBI-ProteinID:
XP_007307918
JGI:
Stehi1_102071
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MQSNALLEPTVRIRTLKRDRVNFVLENAELAFANSLRRVMMADLPTIAIDMVEIETNTTV
LPDEFIAHRLGMIPLVSANCDEAMRYNRDCTCATNCSACSVKLHLNVACHDNRTMDITSN
HLDVVPHDYTDYAADEQQEEFHKRIDTFGHPVGKNDPNVQPVLICKIRKGQELKVRCIAK
KGIAKEHAKWSPCSAVSFEYDPHNKLRHTSYWFEGDARSEWPLSENAKEEEPPRDDEPFD
YNAKPNKFYFEVETDGSLGPQEVVMKGLGELQTKLANLILGLKSDQLPSTDTALPGTGPS
APGAPQTNGINGTTAGSPSVPSWGTGAAHPSPPPGWNSSPNGTGIPAWGASPTAGGAWGA
SPGGAGSPAAAPPAWGNVAATRGAWGDAGASTSPAWNAGAGSPRQQGGWNV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaacgcccttctcgaaccgacagtccgtatcagaactctgaaaagagacaga
gtgaactttgttcttgaaaatgcagagctagctttcgccaactcgttacggagagtgatg
atggcagatcttccaacaattgctatcgacatggtggagatcgagacaaacacgaccgtg
ctccccgatgaattcatcgcacaccgacttggcatgatccccctcgtaagcgcgaactgt
gacgaagctatgcggtataacagggactgcacatgtgcaacgaactgttccgcctgttcc
gtcaaactccacttgaacgtcgcatgccacgacaaccgaaccatggacatcacgagcaat
catctcgatgtcgtaccgcacgactacacggattatgcggcggacgagcagcaagaggag
tttcataagcggatcgacacgtttggtcatcctgtggggaaaaatgacccaaatgttcag
cccgttctcatatgcaaaattcgcaagggacaagagcttaaggtccgctgcatagccaaa
aagggtatcgcaaaagagcatgccaaatggtctccatgttccgccgtgtctttcgagtac
gacccacacaacaaacttcgccacacatcttactggttcgagggcgacgcccgctcagaa
tggccactcagtgaaaacgcgaaggaggaagagccacctagagacgacgagcctttcgat
tacaatgcaaagccaaacaagttctacttcgaggtcgagacggacggaagtcttggtcca
caagaggttgtcatgaagggtcttggagaactccaaacaaaactagccaacctcatcctc
ggtctcaaatccgaccaactcccctccacagacaccgctctccccggcaccggtccctcc
gccccaggcgcaccccaaaccaacggcatcaacggcaccaccgccggctctccctcagta
cccagctggggcaccggtgccgctcacccatcgccacccccaggttggaattcatccccg
aacggtaccggaattcctgcctggggcgcctcacccaccgctggaggtgcatggggggcg
agtcccggcggtgcgggttcgcctgctgcggctcctcctgcgtgggggaatgtggctgct
acgagaggggcttggggcgacgcgggggcgtcgacgagtcctgcgtggaatgcgggagct
gggagtcctagacagcagggtggatggaacgtttga
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integrated database retrieval system
