Stereum hirsutum: STEHIDRAFT_117763
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Entry
STEHIDRAFT_117763 CDS
T03127
Name
(RefSeq) polyubiquitin-tagged protein recognition complex Npl4 component
KO
K14015
nuclear protein localization protein 4
Organism
shs
Stereum hirsutum
Pathway
shs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
STEHIDRAFT_117763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_117763
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
STEHIDRAFT_117763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
18796174
NCBI-ProteinID:
XP_007299087
JGI:
Stehi1_117763
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MLVRIRSRDGNFRFEVEPTTKIEELVAKIVETTTDCDVSTLAISNQPRGNETSVSTLKGR
NMKDLGLKHGDLVFVSYQQRPSGSVSQAPAQVVANASKPTGIQVSTARPWENVEEDAVDR
YWRSQDGKIPRGRDAQFCKHGPNAMCDHCMPLEPYDSSYHTEHNIKHLSFHSYLRKLTPK
TSSTAAASLPPLSPPDYKVKVPCPTGGHLPWPAGICTACQPSAITLQSQPFRTVDHLEIA
SMDIVDRFLHAWRVTGVQRFGWLIGRYEPYDKVPMGVKAVVEAIHEPPQEGELDGLSLGL
PWDDEPRLKELAKSASTPLSIVGYIFTDLDPEPEDRSKTKYKRHPNSFFLSSLEVIFAAH
MQSLHPMPSRSSPTGAFSSRLVTAVLTGTEDNQIDVSAYQVSEQAVGMVQADMIEASVDP
GVMRVKAESRGEDGDEARYVPDVFFRYRNEYKIEVKKSAKPAFPVEYLLVNVTHGFPQNP
SPLFHSIAFPIENRPGLEDQKIEKVLHRLNELHAPDVQDSKHDRDVLRRLALAKYLSDWH
LVAFLGTSGLFSEADMKVLIKVASAQSLDDPAVLDPLVGTESWQTIITFARESGPPARPS
QPAPSGASSHLMDEDIPPELYEQFGGAEGAGGLGGLGGGAGSGAGGSGGGGLRVCPHCTF
ENSHGGSDCEVCGLPL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttcgtattcgctcccgcgatggtaactttcgtttcgaagtggagcccaccacc
aagatcgaagagctcgtggccaagatagtggaaacgaccacagactgtgatgtctcgacc
ctcgcgatctcgaatcagcctcgaggcaacgagacctctgtctccacactaaaggggcgc
aacatgaaggatctcgggctcaaacatggggacctcgtctttgtttcttaccaacaacgg
ccgtcgggaagcgtgtctcaagcaccagcccaggtcgtggccaatgcctctaaaccgaca
ggtatccaggtttccactgctcggccatgggagaatgtcgaagaggatgcagtcgaccgt
tactggcgctcccaggatggtaagattcctcggggtcgtgatgctcaattctgcaagcac
ggccccaacgccatgtgcgaccattgcatgcccctcgaaccctacgattcctcttatcac
accgaacataacatcaaacatctttctttccattcctacctccggaaactcacaccgaag
acctcttccactgccgctgcttcccttccaccgctgtctccgccggactacaaagtgaag
gtgccttgtccgactggtggccatctcccctggcccgcagggatctgtactgcatgccaa
ccttcagctatcaccctccagagtcaacccttccgtacagtcgaccatctcgagatcgcc
tccatggacatcgtcgaccggttcctgcacgcttggcgcgtaactggtgtccaacgcttc
ggctggctgatcggccgttacgagccctacgacaaagtccctatgggtgtcaaagccgtt
gtcgaagccatccacgaaccacctcaagaaggcgaactggacggtctctcgctcggtcta
ccttgggatgacgaaccacggttgaaggagctcgccaaatctgcgtcgacgcccttgtcg
atcgtgggctatatcttcacggatttggatcctgagccggaagataggtcaaagacgaaa
tacaagagacacccgaattcgttctttctctcttccctcgaagtcatcttcgccgcacac
atgcaatccctccaccctatgccctctcgatcctcgcccaccggagccttctcctcgaga
ctcgtcaccgccgtactgacgggtacagaggacaatcagatcgacgtgtcggcgtatcag
gtttcggaacaggctgtggggatggtacaggcggatatgatcgaggcgagcgtggatccc
ggggtgatgagagtgaaggcagagagtagaggcgaagacggggacgaggcgagatatgtg
cccgacgtgtttttcaggtataggaatgagtataagatcgaggtgaagaagagtgcgaag
ccggcgttccctgtagaatacttgctcgtcaatgtcacacatgggttcccacaaaatcca
tctccgttgttccattctatcgccttcccaatcgaaaacagaccaggcctagaagatcaa
aaaatcgagaaagtcctgcacagactcaacgagctccatgctcccgacgtccaggacagc
aaacacgaccgcgacgtgctccgccgtctcgcactcgccaagtatctctcggattggcat
ctggtggcctttttggggacgtctgggttgttctctgaggcggatatgaaagtcttgata
aaggtcgcctctgcacagagcttggacgatccggcggtgcttgaccctctcgttggaacg
gaaagctggcagaccatcatcacattcgctcgcgaatcaggcccacccgcacgtccctcg
caacctgctccctctggagcctcctcccacctcatggacgaagacatccctccagagctg
tacgaacagttcggaggtgcggaaggtgcaggtggactcgggggccttggtggtggcgcc
ggatcgggagctggcgggtctggtgggggagggctgagggtgtgtccgcattgtacgttt
gagaattcgcatggggggtcggactgtgaggtttgcgggttgccgttgtga
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