Stereum hirsutum: STEHIDRAFT_49157
Help
Entry
STEHIDRAFT_49157 CDS
T03127
Name
(RefSeq) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
shs
Stereum hirsutum
Pathway
shs03022
Basal transcription factors
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
STEHIDRAFT_49157
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_49157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_49157
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_49157
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
STEHIDRAFT_49157
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
STEHIDRAFT_49157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
18804969
NCBI-ProteinID:
XP_007299327
JGI:
Stehi1_49157
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MPIAVEKQEEQTSGPSPHALLPFLQSQSQTALTRLYNRPSSCLSIFRLLAPVERQLVMNL
LWLESAIPTNTMSSWVVKENKKFFDEALAQLTRLHILPNPSAKLGLNPTFKTSLRHAITG
GGTSGSFGVPAEADDKRGPPSVEILDTYALERWETILHFMVSSGTGQMPTKPSQGVLYLL
QRSKLMAPTQGTLQITSSGFQFLLHTPHAQLWELLLQYLAMVEERQMDLVEVLSFLFMLS
TMELGRVRQFHDYSAESLSDTQKAMLEDLRDYGLIWQRKATSRRFSPTRLATTLTSSLPP
LPTASGTGTSGTGQTQGFIILETNYRLYAYTDNPLQTAVLNLFVTMKSRFPNLVVGSITR
DSVRKALSNGITADQIISYLTTYAHPQMRKNVSRCRSFTPLLPVTVQDQIRLWELERNRL
KSQEGFLYTAFASQADYEYVLTYAKQLDVVLWENPTKRCFFGTMEGHANIRGFIERRTAA
GGGGAGAGLGGGGF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgccgtggagaagcaagaagaacaaacgagcggaccaagcccccatgctctt
ctcccctttcttcagtcccagtctcagaccgcactcacccgtctctacaaccggccctcg
tcatgtctctccatctttcgccttctcgctcccgtcgagcgacaactcgtcatgaatctt
ctttggctggagtcggccatccccacgaataccatgagctcctgggtagtaaaggagaac
aagaaatttttcgacgaagccctagctcaattaacacggcttcatatcctccctaatcca
tctgccaagctgggcctcaacccaaccttcaagaccagccttcgacatgcaattacaggc
ggtggtacgagtggtagttttggtgttccagcggaggcagatgataagagaggcccaccg
agcgttgagatactggacacgtacgccttggagcgatgggagactatcctgcatttcatg
gtatcctctggaacaggccaaatgcccacaaaaccgtcacaaggcgttttgtacctccta
caacgcagcaagctcatggctccgactcaaggcacattgcagatcacttcgtcaggattc
caattcctcttacacacgccacacgcccagctctgggagctgttgttgcagtatcttgca
atggttgaagaacggcagatggatcttgtcgaggtactcagcttcctcttcatgctctct
accatggagctcggtcgggtacgacagtttcatgattattcggcagaaagcctgagtgat
acccaaaaagccatgcttgaagatctccgtgattacggtctgatctggcagcgcaaggct
acttcccgtcggttcagccctactcgtctagcgacgactcttacttcttcattaccacct
ctacccactgcctccggaacgggtacaagtggaactggacagacgcaaggcttcatcatc
ctagaaacgaactatcgattgtatgcgtacacagataatccactacagacggcggttctg
aacctgtttgtgacgatgaagagtcgatttccgaatcttgtggtgggttccatcacaagg
gacagtgtacggaaggcgctgtcgaacgggatcacggcagaccaaatcataagttatttg
acgacatacgcacatcctcagatgcgtaaaaacgtgagtcgatgtcgttcgttcacgccc
ttgctgcctgtgacggttcaagaccagatccgactatgggagctcgagcggaacaggctc
aaatctcaggagggattcctgtacaccgcattcgcctcgcaagccgattacgaatacgtc
ctcacttacgctaaacagctcgacgtcgtcctctgggagaaccccaccaagcgatgtttc
ttcggcacgatggagggccatgcgaatattaggggttttatcgagaggaggacggcggct
gggggtggtggggccggtgctggcttgggaggcggcgggttttag
DBGET
integrated database retrieval system