KEGG   Stereum hirsutum: STEHIDRAFT_49157
Entry
STEHIDRAFT_49157  CDS       T03127                                 
Name
(RefSeq) transcription factor Tfb2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
shs  Stereum hirsutum
Pathway
shs03022  Basal transcription factors
shs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    STEHIDRAFT_49157
  09124 Replication and repair
   03420 Nucleotide excision repair
    STEHIDRAFT_49157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_49157
   03400 DNA repair and recombination proteins [BR:shs03400]
    STEHIDRAFT_49157
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     STEHIDRAFT_49157
DNA repair and recombination proteins [BR:shs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     STEHIDRAFT_49157
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 18804969
NCBI-ProteinID: XP_007299327
JGI: Stehi1_49157
LinkDB
Position
Unknown
AA seq 494 aa
MPIAVEKQEEQTSGPSPHALLPFLQSQSQTALTRLYNRPSSCLSIFRLLAPVERQLVMNL
LWLESAIPTNTMSSWVVKENKKFFDEALAQLTRLHILPNPSAKLGLNPTFKTSLRHAITG
GGTSGSFGVPAEADDKRGPPSVEILDTYALERWETILHFMVSSGTGQMPTKPSQGVLYLL
QRSKLMAPTQGTLQITSSGFQFLLHTPHAQLWELLLQYLAMVEERQMDLVEVLSFLFMLS
TMELGRVRQFHDYSAESLSDTQKAMLEDLRDYGLIWQRKATSRRFSPTRLATTLTSSLPP
LPTASGTGTSGTGQTQGFIILETNYRLYAYTDNPLQTAVLNLFVTMKSRFPNLVVGSITR
DSVRKALSNGITADQIISYLTTYAHPQMRKNVSRCRSFTPLLPVTVQDQIRLWELERNRL
KSQEGFLYTAFASQADYEYVLTYAKQLDVVLWENPTKRCFFGTMEGHANIRGFIERRTAA
GGGGAGAGLGGGGF
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgccaatcgccgtggagaagcaagaagaacaaacgagcggaccaagcccccatgctctt
ctcccctttcttcagtcccagtctcagaccgcactcacccgtctctacaaccggccctcg
tcatgtctctccatctttcgccttctcgctcccgtcgagcgacaactcgtcatgaatctt
ctttggctggagtcggccatccccacgaataccatgagctcctgggtagtaaaggagaac
aagaaatttttcgacgaagccctagctcaattaacacggcttcatatcctccctaatcca
tctgccaagctgggcctcaacccaaccttcaagaccagccttcgacatgcaattacaggc
ggtggtacgagtggtagttttggtgttccagcggaggcagatgataagagaggcccaccg
agcgttgagatactggacacgtacgccttggagcgatgggagactatcctgcatttcatg
gtatcctctggaacaggccaaatgcccacaaaaccgtcacaaggcgttttgtacctccta
caacgcagcaagctcatggctccgactcaaggcacattgcagatcacttcgtcaggattc
caattcctcttacacacgccacacgcccagctctgggagctgttgttgcagtatcttgca
atggttgaagaacggcagatggatcttgtcgaggtactcagcttcctcttcatgctctct
accatggagctcggtcgggtacgacagtttcatgattattcggcagaaagcctgagtgat
acccaaaaagccatgcttgaagatctccgtgattacggtctgatctggcagcgcaaggct
acttcccgtcggttcagccctactcgtctagcgacgactcttacttcttcattaccacct
ctacccactgcctccggaacgggtacaagtggaactggacagacgcaaggcttcatcatc
ctagaaacgaactatcgattgtatgcgtacacagataatccactacagacggcggttctg
aacctgtttgtgacgatgaagagtcgatttccgaatcttgtggtgggttccatcacaagg
gacagtgtacggaaggcgctgtcgaacgggatcacggcagaccaaatcataagttatttg
acgacatacgcacatcctcagatgcgtaaaaacgtgagtcgatgtcgttcgttcacgccc
ttgctgcctgtgacggttcaagaccagatccgactatgggagctcgagcggaacaggctc
aaatctcaggagggattcctgtacaccgcattcgcctcgcaagccgattacgaatacgtc
ctcacttacgctaaacagctcgacgtcgtcctctgggagaaccccaccaagcgatgtttc
ttcggcacgatggagggccatgcgaatattaggggttttatcgagaggaggacggcggct
gggggtggtggggccggtgctggcttgggaggcggcgggttttag

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