KEGG   Stella humosa: STHU_22400
Entry
STHU_22400        CDS       T06078                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
shum  Stella humosa
Pathway
shum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STHU_22400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shum03019]
    STHU_22400
   03400 DNA repair and recombination proteins [BR:shum03400]
    STHU_22400
Enzymes [BR:shum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     STHU_22400
Messenger RNA biogenesis [BR:shum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     STHU_22400
DNA repair and recombination proteins [BR:shum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      STHU_22400
SSDB
Motif
Pfam: RQC DEAD HRDC Helicase_C RecQ_Zn_bind ResIII WSD
Other DBs
NCBI-ProteinID: BBK31606
LinkDB
Position
2361414..2363264
AA seq 616 aa
MAAMSIRHAAQPAVAATAAHSSARTALKTVFGFDAFKPGQEAVVDAVLAGRDVLAVMPTG
SGKSLCYQLPALMRDGPVVVVSPLIALMRDQVRQMRDYGVAAGSLNSANDADENRRVWGA
LRDGTLRLVYAAPERLVREDTVAMLRDCRPSLLAIDEAHCVSQWGHDFRPEYLALGQVRA
ALGGVQTIALTATADAATRADIVARLFEVEPEVFVQGFDRPNLFLAMQPKGSARNQVAAF
VAQRTGANGIVYCSSRKKTEELAEYLRGQGHRALAYHAGLEKERRDEVQDTFQAEDGIVV
VATVAFGMGIDKPDVRYVAHADLPKSVEAYYQEIGRAGRDGLPADTLTLYGLDDMRLRRV
QIEESDASEAQKRVERQRFNALVALCEAPRCRRQTLLAYFGETTEPCGHCDLCLQGVETF
DGTIEAQKAMSAILRTGERFGTEHLVQILTGADTEAIRRFGHDRLPTYGVGKERDANGWR
SIFRQIYAAGLIQIDIVQHGRWTVTDRGRRVLRGEERIEIRRDVMTAGPKVKGKAPPAAA
AAPEDAGLLAALKALRTELAKTQGVPAYVVFADRTLLDMAARRPANADAMRQVHGVGEAK
VARYGDRFLEVVARFR
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggccgccatgtcgattcgccatgccgcccagcctgccgtcgccgcgacggccgcccac
agttcggcgcgcaccgcgctcaagaccgtcttcggtttcgatgccttcaagccggggcag
gaggcggtggtcgacgccgtgctggccggccgcgacgtgctggcagtgatgccgaccggc
agcggcaagtcgctgtgctaccagcttccggccctgatgcgcgacggcccggtggtggtg
gtgtcgccgctgatcgcgctgatgcgcgaccaggtgcggcagatgcgcgattatggcgtg
gccgccggcagcctgaactcggccaacgatgccgacgagaaccggcgcgtctggggggcc
ttgcgggacggcacgctgcggctggtctatgcagcacccgagcgcctggtgcgcgaggac
accgtcgccatgctgcgcgactgccgcccgtcgctgctggcgatcgacgaggcccattgc
gtctcgcagtggggccatgacttccggccggagtacctggccctggggcaggtgcgggcg
gccctcggcggggtgcagactatcgcactcaccgccaccgccgacgccgccacccgcgcc
gacatcgtcgcccgcctgttcgaggtcgagccggaggtcttcgtccaggggttcgaccgg
ccgaacctgttcctggcgatgcagcccaagggcagcgcgcgcaaccaggtggcggccttc
gttgcccagcggacgggtgccaacggcatcgtctactgctcctcgcgcaagaagaccgag
gaactggcggaatacctgcgcgggcaggggcaccgggcgctggcctaccatgccggcctg
gagaaggagcggcgcgacgaggtgcaggacaccttccaggccgaggacggcatcgtcgtc
gtcgccaccgtcgccttcggcatgggcatcgacaagccggatgtgcgctacgtcgcccat
gccgacctgccgaagtcagtcgaggcctactaccaggagatcggccgcgccggccgcgac
gggctgccggccgacacgctgacgctctatggcctggacgacatgcgcctgcgccgggtg
cagatcgaggagagcgacgcgtcggaggcgcagaagcgggtcgagcggcagcggttcaac
gcgctggtcgcgttgtgcgaggcgccgcgctgccgccgccagacgctgctggcctatttc
ggcgagacgaccgagccgtgcgggcattgcgacctgtgcctgcaaggcgtcgagacattc
gacggcaccatagaggcgcagaaggccatgtcggccatcctgcgcacgggcgagcgcttc
ggcaccgagcatctggtgcagatcctgaccggggccgacacggaggcgatccgccgcttc
ggccatgaccgcctgccgacctatggcgtcggcaaggagcgtgacgccaatggctggcgc
tcgatcttccggcagatctatgccgccggcctgatccagatcgacatcgtccagcatggc
cgctggaccgtcaccgaccgcggccgccgggtgctgcgcggcgaggagcggatcgagatc
cgtcgcgacgtgatgaccgccgggcccaaggtgaagggcaaggcgccgcccgccgccgcc
gcggcacccgaggatgcgggcctactggcggcgctcaaggcgctccgcaccgaactggcc
aagacgcagggcgtgccggcctatgtcgtcttcgccgaccgaacgctgctcgacatggcg
gcccgccggccggccaatgccgacgccatgcgccaggtgcacggcgtcggcgaggccaag
gtcgcgcgctacggcgaccgcttcctggaagtggtggcgcgcttccggtag

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