Stella humosa: STHU_33180
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Entry
STHU_33180 CDS
T06078
Symbol
ku_1
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
shum
Stella humosa
Pathway
shum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
STHU_33180 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_33180 (ku_1)
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
STHU_33180 (ku_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BBK32684
LinkDB
All DBs
Position
3503524..3504381
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AA seq
285 aa
AA seq
DB search
MAQRANWKGFLKVAELTCPVALYTAASTSDRIAFHTLNRATGHRVRRKFVDSETGKPVES
DDQVKGYEIADGDYIALEPDEVAAAVPDGDRTLAVDTFIGCGDIDDVYFDRPYYLAPTDR
HAQEAFALIREGMKAKKVAALARTVIFRRVRTFLIRAHGAGLIATTLNFDYEVRPAGDAF
QDVPDIKINPEMLELARHIIKTKKGKFDPAKFEDRYEDALAELVKAKLEGKPIPKPKAPE
ATKVVDLMQALRDSAGKGKRKPAAAVAKSKAKAAPKPAPARRKAG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttggcacagcgggcgaactggaagggcttcctcaaggtagcggagctgacctgccccgtt
gccctctacacggcggcgtccacctctgaccgcatcgccttccacacgctgaaccgggcg
acgggccatcgcgtccggcgcaagttcgtcgacagcgagacgggcaagccggtcgagagc
gacgaccaggtgaagggctatgagatcgccgacggcgactacatcgcgcttgagccggat
gaggtcgcggccgccgtgcccgacggcgaccgcacgctggcggtcgacaccttcatcggc
tgcggcgacatcgacgacgtctatttcgaccgcccctactacctggcgcccaccgaccgc
cacgcgcaggaggccttcgccctcatccgcgagggcatgaaggcaaagaaggtggcagcg
ctcgcccgcaccgtcatctttcgccgggtccgcaccttcctgatccgcgcgcacggggcg
ggcctgatcgccaccacgctcaacttcgactacgaggtacggccggccggcgacgccttc
caggacgtgcccgacatcaagatcaatcccgagatgctggaactggcccgccacatcatc
aagaccaagaagggcaagttcgacccggccaaattcgaggaccgctacgaggacgcactc
gccgagctggtgaaggccaagctggaaggcaagcccatccccaagcccaaggcgcccgag
gcgaccaaggtggtcgacctgatgcaggcgctgcgcgacagcgccggcaagggcaaacgc
aagccggccgctgccgttgccaagagcaaggccaaggccgcaccgaagcccgctcccgcg
cggcgcaaggcgggatag
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