KEGG   Salinicoccus halodurans: AAT16_08305
Entry
AAT16_08305       CDS       T03940                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
shv  Salinicoccus halodurans
Pathway
shv03030  DNA replication
shv03410  Base excision repair
shv03420  Nucleotide excision repair
shv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAT16_08305
   03410 Base excision repair
    AAT16_08305
   03420 Nucleotide excision repair
    AAT16_08305
   03440 Homologous recombination
    AAT16_08305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shv03032]
    AAT16_08305
   03400 DNA repair and recombination proteins [BR:shv03400]
    AAT16_08305
Enzymes [BR:shv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AAT16_08305
DNA replication proteins [BR:shv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AAT16_08305
DNA repair and recombination proteins [BR:shv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AAT16_08305
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AAT16_08305
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AKG74234
UniProt: A0A0F7HL53
LinkDB
Position
complement(1658471..1661074)
AA seq 867 aa
MKKLILIDGNSVAFRAFYGLPLLSNQSGLHTNAIFGYARLLEKIIKDEEPTHFLVAFDAG
KSTFRHKQYSEYKGGRQKMPPELGEQLAPIRRLIDAYGIKRYEIEEFEADDIIGTLSREA
DEDENFQTIIITGDKDLTQLASDKTVIYYTKKGISDIDLYNPEFIDEKYGLKPFQIVDLK
GLMGDKSDNIPGVPGVGEKTALKLLATYGSVEKVLDNIDAVAGKKLKENLTEHKEDALMS
KELATIHREVPFDFNLDDLAFSDDNEEEKYELFKELEFESLLGNMEANEAEDKIVFDDVR
VESMDELGQEVSLHLEVNAGNYLVNPPEYIAVTDGNKTFVDEIEAVDAGTLGKFLNSRRA
INVYDLKRQTGLLRQLAIRFNDFTTDVMLASFLLDPSRKILDVAETAGQFGISVDSDDYH
YGKGRKSKNPPHEERVEFLNSKVMAVHMLKDKVVKSLQEDEMYDLWMDLEIPLSKVLAEM
EIKGITVDASRLVEMETEIQERLNAIESKIHEFAGEDFNINSPKQLGRVLFEKLELPVIK
KTKTGYSTAVDVLEQLQDKHEIIRYLLDYRTLSKLQSTYVIGLQGEIKEDSRIHTRFNQT
LAQTGRLSSVEPNLQNIPIRIEEGRRIRKAFVPKDENHVLLALDYSQIELRVLAHITQDA
TMISAFTSNTDIHTKTAMEVFGVEKEDVTSEMRRNAKAVNFGIVYGISDYGLSQNLGITR
KEAKKFIENYLDSFAEVKEFMKTIVQDAKRDGYVKTLMNRRRYIPDIHSRNFNARSFAER
TAMNSPIQGSAADIIKLAMVKYAQSEEAQKFDAELLLQIHDELIFDIPKSQVEDFIPVIK
GIMEHAMEMNVPLKVEYGYGTDWYEVK
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgaaaaaattaattttgatagatggtaacagtgtagctttcagagctttttacggattg
ccgcttctgagcaaccagagcggtctccatacgaatgcgatattcggctacgcccgtctt
ctggaaaaaatcataaaagacgaagaacccacacatttccttgtggcgtttgatgcaggg
aaatccacattcagacataagcagtattcggagtataaaggcggccgtcagaagatgccg
ccggagcttggtgaacagctggcgccgatccgccgtctgattgatgcctatggtattaaa
agatatgaaattgaagaatttgaagcggatgatatcatcggcacattgagccgcgaggcg
gacgaggatgaaaattttcagacgatcatcataacgggtgataaagaccttacacaactt
gcaagtgacaagactgtgatttactacacgaaaaaaggcatatccgatattgatctctac
aacccggagttcatcgatgaaaaatacggattgaagccgtttcagattgtcgatctgaaa
ggtctgatgggggataagtcggacaatattcccggtgtccccggagtgggggaaaagacg
gccctgaaactgcttgccacttacggctcggtggaaaaagtgctcgataatatagatgct
gtcgccggcaagaagctcaaggagaatctgactgaacataaagaggatgctctgatgagc
aaggaacttgcgacaatccacagggaagtgccgtttgatttcaatttggatgatctggct
ttttccgatgataatgaagaagagaaatatgaattgttcaaagaactcgaatttgaatca
cttctcggtaatatggaagccaatgaagcggaggataagatcgtttttgatgatgtacgt
gtagaatccatggatgaactcggtcaggaagtatcactccacctggaagtgaacgccggc
aattatctggttaatccgcctgaatatatcgcagttactgatggaaataagacgtttgtc
gatgaaattgaagcggtcgatgccgggacgctgggaaaattcctgaattccaggagggcc
atcaatgtctatgatttgaaacgtcagacgggtctgctgaggcagctggccatcaggttc
aatgattttactacagatgttatgctggcaagtttcctgcttgatccatcccgtaagata
ttggatgtcgccgagactgcgggtcagtttggtatctcagttgacagtgatgactaccac
tatggtaaaggcaggaaatccaaaaatccgccgcatgaagaacgtgtggagtttcttaac
tccaaagtgatggcagtgcatatgctgaaagataaagtggtcaaatcccttcaggaagat
gagatgtatgatctatggatggaccttgaaatcccgctttccaaagtgcttgctgaaatg
gaaataaaggggataaccgtggatgcctcaagacttgttgaaatggaaactgaaatacag
gaacgtctgaatgcaatagaatcgaaaattcatgagtttgccggggaggatttcaacata
aactcgccgaagcagcttggccgggtgctgtttgaaaaattggaactgcctgtgatcaaa
aaaacaaagaccggctattccactgcggtggatgtattggaacagctgcaggataaacat
gaaatcatccggtatcttctggattaccggactttatccaaattacagtctacttatgtc
ataggactgcagggggagataaaagaagattcgagaatccatacacgtttcaatcagaca
ttggcacaaacgggaaggctgtcttcagttgagccgaatcttcagaatatcccgatccgt
attgaagaagggcggaggatacgaaaggcattcgtaccaaaagatgagaatcacgtattg
cttgcactggactattcacagattgaactccgagtgctcgcacatataacacaggatgcg
acgatgatcagtgcatttacatccaataccgacatccatacaaaaacggccatggaagta
ttcggcgtcgagaaagaagatgttacatccgagatgcggcggaatgcaaaagctgtcaac
ttcgggatagtctacggaatcagtgactatggactgagtcagaatctgggcatcacgcgg
aaagaggcaaaaaaattcattgaaaactatctggattcctttgctgaagttaaagaattt
atgaaaacgatagtgcaggatgccaaaagagacggctatgttaagacattgatgaacaga
agacggtatatccctgatattcacagccggaacttcaacgcgaggagctttgcagaacgc
acagcgatgaattcgcctatacaggggagcgctgcggacatcatcaagctggccatggta
aaatatgcacagtctgaagaagcgcagaaattcgatgcagaactattattgcagatacat
gatgaactgatctttgatattccaaaaagtcaggttgaagattttattcctgtcattaag
ggaatcatggagcatgcgatggagatgaacgtaccgcttaaagtggagtatggatacggt
acagattggtatgaagtgaagtag

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