Salinicoccus halodurans: AAT16_08305
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Entry
AAT16_08305 CDS
T03940
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shv
Salinicoccus halodurans
Pathway
shv03030
DNA replication
shv03410
Base excision repair
shv03420
Nucleotide excision repair
shv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAT16_08305
03410 Base excision repair
AAT16_08305
03420 Nucleotide excision repair
AAT16_08305
03440 Homologous recombination
AAT16_08305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shv03032
]
AAT16_08305
03400 DNA repair and recombination proteins [BR:
shv03400
]
AAT16_08305
Enzymes [BR:
shv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAT16_08305
DNA replication proteins [BR:
shv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAT16_08305
DNA repair and recombination proteins [BR:
shv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AAT16_08305
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAT16_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKG74234
UniProt:
A0A0F7HL53
LinkDB
All DBs
Position
complement(1658471..1661074)
Genome browser
AA seq
867 aa
AA seq
DB search
MKKLILIDGNSVAFRAFYGLPLLSNQSGLHTNAIFGYARLLEKIIKDEEPTHFLVAFDAG
KSTFRHKQYSEYKGGRQKMPPELGEQLAPIRRLIDAYGIKRYEIEEFEADDIIGTLSREA
DEDENFQTIIITGDKDLTQLASDKTVIYYTKKGISDIDLYNPEFIDEKYGLKPFQIVDLK
GLMGDKSDNIPGVPGVGEKTALKLLATYGSVEKVLDNIDAVAGKKLKENLTEHKEDALMS
KELATIHREVPFDFNLDDLAFSDDNEEEKYELFKELEFESLLGNMEANEAEDKIVFDDVR
VESMDELGQEVSLHLEVNAGNYLVNPPEYIAVTDGNKTFVDEIEAVDAGTLGKFLNSRRA
INVYDLKRQTGLLRQLAIRFNDFTTDVMLASFLLDPSRKILDVAETAGQFGISVDSDDYH
YGKGRKSKNPPHEERVEFLNSKVMAVHMLKDKVVKSLQEDEMYDLWMDLEIPLSKVLAEM
EIKGITVDASRLVEMETEIQERLNAIESKIHEFAGEDFNINSPKQLGRVLFEKLELPVIK
KTKTGYSTAVDVLEQLQDKHEIIRYLLDYRTLSKLQSTYVIGLQGEIKEDSRIHTRFNQT
LAQTGRLSSVEPNLQNIPIRIEEGRRIRKAFVPKDENHVLLALDYSQIELRVLAHITQDA
TMISAFTSNTDIHTKTAMEVFGVEKEDVTSEMRRNAKAVNFGIVYGISDYGLSQNLGITR
KEAKKFIENYLDSFAEVKEFMKTIVQDAKRDGYVKTLMNRRRYIPDIHSRNFNARSFAER
TAMNSPIQGSAADIIKLAMVKYAQSEEAQKFDAELLLQIHDELIFDIPKSQVEDFIPVIK
GIMEHAMEMNVPLKVEYGYGTDWYEVK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattttgatagatggtaacagtgtagctttcagagctttttacggattg
ccgcttctgagcaaccagagcggtctccatacgaatgcgatattcggctacgcccgtctt
ctggaaaaaatcataaaagacgaagaacccacacatttccttgtggcgtttgatgcaggg
aaatccacattcagacataagcagtattcggagtataaaggcggccgtcagaagatgccg
ccggagcttggtgaacagctggcgccgatccgccgtctgattgatgcctatggtattaaa
agatatgaaattgaagaatttgaagcggatgatatcatcggcacattgagccgcgaggcg
gacgaggatgaaaattttcagacgatcatcataacgggtgataaagaccttacacaactt
gcaagtgacaagactgtgatttactacacgaaaaaaggcatatccgatattgatctctac
aacccggagttcatcgatgaaaaatacggattgaagccgtttcagattgtcgatctgaaa
ggtctgatgggggataagtcggacaatattcccggtgtccccggagtgggggaaaagacg
gccctgaaactgcttgccacttacggctcggtggaaaaagtgctcgataatatagatgct
gtcgccggcaagaagctcaaggagaatctgactgaacataaagaggatgctctgatgagc
aaggaacttgcgacaatccacagggaagtgccgtttgatttcaatttggatgatctggct
ttttccgatgataatgaagaagagaaatatgaattgttcaaagaactcgaatttgaatca
cttctcggtaatatggaagccaatgaagcggaggataagatcgtttttgatgatgtacgt
gtagaatccatggatgaactcggtcaggaagtatcactccacctggaagtgaacgccggc
aattatctggttaatccgcctgaatatatcgcagttactgatggaaataagacgtttgtc
gatgaaattgaagcggtcgatgccgggacgctgggaaaattcctgaattccaggagggcc
atcaatgtctatgatttgaaacgtcagacgggtctgctgaggcagctggccatcaggttc
aatgattttactacagatgttatgctggcaagtttcctgcttgatccatcccgtaagata
ttggatgtcgccgagactgcgggtcagtttggtatctcagttgacagtgatgactaccac
tatggtaaaggcaggaaatccaaaaatccgccgcatgaagaacgtgtggagtttcttaac
tccaaagtgatggcagtgcatatgctgaaagataaagtggtcaaatcccttcaggaagat
gagatgtatgatctatggatggaccttgaaatcccgctttccaaagtgcttgctgaaatg
gaaataaaggggataaccgtggatgcctcaagacttgttgaaatggaaactgaaatacag
gaacgtctgaatgcaatagaatcgaaaattcatgagtttgccggggaggatttcaacata
aactcgccgaagcagcttggccgggtgctgtttgaaaaattggaactgcctgtgatcaaa
aaaacaaagaccggctattccactgcggtggatgtattggaacagctgcaggataaacat
gaaatcatccggtatcttctggattaccggactttatccaaattacagtctacttatgtc
ataggactgcagggggagataaaagaagattcgagaatccatacacgtttcaatcagaca
ttggcacaaacgggaaggctgtcttcagttgagccgaatcttcagaatatcccgatccgt
attgaagaagggcggaggatacgaaaggcattcgtaccaaaagatgagaatcacgtattg
cttgcactggactattcacagattgaactccgagtgctcgcacatataacacaggatgcg
acgatgatcagtgcatttacatccaataccgacatccatacaaaaacggccatggaagta
ttcggcgtcgagaaagaagatgttacatccgagatgcggcggaatgcaaaagctgtcaac
ttcgggatagtctacggaatcagtgactatggactgagtcagaatctgggcatcacgcgg
aaagaggcaaaaaaattcattgaaaactatctggattcctttgctgaagttaaagaattt
atgaaaacgatagtgcaggatgccaaaagagacggctatgttaagacattgatgaacaga
agacggtatatccctgatattcacagccggaacttcaacgcgaggagctttgcagaacgc
acagcgatgaattcgcctatacaggggagcgctgcggacatcatcaagctggccatggta
aaatatgcacagtctgaagaagcgcagaaattcgatgcagaactattattgcagatacat
gatgaactgatctttgatattccaaaaagtcaggttgaagattttattcctgtcattaag
ggaatcatggagcatgcgatggagatgaacgtaccgcttaaagtggagtatggatacggt
acagattggtatgaagtgaagtag
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