Shewanella sp. W3-18-1: Sputw3181_3197
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Entry
Sputw3181_3197 CDS
T00453
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00061
Fatty acid biosynthesis
shw00071
Fatty acid degradation
shw01100
Metabolic pathways
shw01212
Fatty acid metabolism
shw02024
Quorum sensing
Module
shw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sputw3181_3197
00071 Fatty acid degradation
Sputw3181_3197
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputw3181_3197
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shw01004
]
Sputw3181_3197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shw04147
]
Sputw3181_3197
Enzymes [BR:
shw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sputw3181_3197
Lipid biosynthesis proteins [BR:
shw01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Sputw3181_3197
Exosome [BR:
shw04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sputw3181_3197
Exosomal proteins of breast cancer cells
Sputw3181_3197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABM26012
UniProt:
A0A6N3J808
LinkDB
All DBs
Position
3651978..3653579
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AA seq
533 aa
AA seq
DB search
MAYDQDSQLKLGYSSLVDLIEKTSLRYGDKPAYACLGKTSSFNEIERDSRYFAAYLQNKT
QLKPGDRIAIQLPNITQFVIAAYGAIRAGLILVNTNPLYTERELIHQFNDSGAKALVVLS
DLLPTLAKVVATTEIELVISTHALDLIEPQIQPKTGLKNIAFCDILKQGAELTFTRLAST
LDDLCALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGEDIFVAPLPIYHIYA
FMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALDF
SHLKITISGGTALTAAAANIWQQTTGNMISEGYGLSETSPVISLNAPGYQKLGTIGKPVI
GTEVKLLDENNIEVPLGTAGELAARGPQVMRGYWNNPQETANVMTPEGFFKTGDIAIATA
EGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPDIIECAVVGVQDEHSGEAVKAFIVLK
DNNLNHEQAKSTILQYCREQLTGYKLPKIIEFMTQLPKSTVGKILRRELKNKA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgatcaagactcccaactcaaactaggctactcatcactcgtcgatctgatc
gaaaaaaccagcctacgctatggtgataaacccgcctatgcctgcttgggtaaaaccagc
agttttaacgagatagagcgagactcccgttactttgccgcctatttgcaaaacaagacc
caactcaaacctggcgatcgtattgccatccaattacccaatatcacgcaatttgttatt
gcagcctacggcgctatcagggctgggctcattctagtcaacaccaatcctctctataca
gagcgcgaacttatccatcagtttaatgattcaggagccaaagccttagttgtactatcg
gatttgctgccaaccttagcaaaagtggtcgccactaccgagattgaattagttatctca
acccatgctctggatttaatagagcctcaaattcaacctaagacaggcctcaaaaatatc
gcgttctgcgatattttaaagcaaggcgcagaactgacctttacccgcctagcgtccaca
ctcgatgatctctgtgcattgcaatatacaggcggtacaacgggattatctaaaggagcc
atgttgacccacggcaatatgctcgccaatgccgcgcaggtaaaatcccgcattggtagc
gtgatatctgaaggcgaagatatcttcgttgcgccattaccgatttaccatatttatgct
tttatggtgaacctagtgctgtattttgagtgcggaggttgctctgttctgatccctaat
cctcgggatatcagcggcttgataaaaaccttagctaaatacccttttactggctttgcc
ggactgaacacgctatttgtcgccctgtgccatcaacccgaatttaaagcactggacttt
agccatttaaaaattaccatctcaggtggtacagcgctcacggccgcggcggccaatatt
tggcaacaaaccacgggtaatatgatcagcgaaggttatggattatctgaaacctcccct
gtcatttcactcaatgcgcccggttatcaaaagctcggcactattggtaaacctgtgatt
ggtactgaggtcaaactattagatgaaaataacattgaagtacctttagggactgcagga
gaattagctgcgcgcggcccgcaggtgatgcgaggatattggaataacccacaagaaacc
gccaatgtgatgacaccagagggcttctttaaaacaggcgatattgccatagcaacggcg
gaaggtttccatcaaattgttgatcgcaaaaaagatatgatcatcgtgtcaggctttaac
gtctaccctaatgaagttgaaaatgtgcttgccagtcatcccgatatcattgagtgcgcg
gttgttggtgtacaagatgaacactcgggggaagcggtcaaagcctttatcgtcctcaag
gacaataacctcaatcatgaacaggctaaaagtacaattttgcagtattgccgcgagcaa
ttaacgggttataaattacctaaaatcattgagtttatgacgcaattacctaaaagcacc
gtcggtaaaattctgcgccgcgaacttaaaaataaggcttaa
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