Schistosoma haematobium (urinary blood fluke): MS3_00003313
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Entry
MS3_00003313 CDS
T05004
Symbol
SS18
Name
(RefSeq) synovial sarcoma translocation, Chromosome 18
KO
K15623
protein SSXT
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MS3_00003313 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00003313 (SS18)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MS3_00003313 (SS18)
GBAF(ncBAF) complex
MS3_00003313 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
24594575
NCBI-ProteinID:
XP_012798604
UniProt:
A0A095A071
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Position
ZW:complement(32370873..32385614)
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AA seq
211 aa
AA seq
DB search
MQPGQLRREQPIQPSSIQKMLDENVRLIHSLMAHQRVGAVKEAVELERVLHRNLIYLATI
ADRTATQPAVGPTNCSHPIPSGLTQPNQIQDSAPNYPLSVVNASSDLSQSSVVGQPHQIS
VNSSVQHPVPMAVGPTTISTVGNPIMYQQYLVSSASHVPNNLQVTSQNHMGISGSSQFQQ
HERVVQHSGGQIASVESSGTVSPNSIAMVSS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctggacagttgcgacgcgagcagcctatacaaccttcgtcgattcagaagatg
ctagatgagaacgtccgacttatacacagtcttatggcacatcaaagagttggagccgtt
aaagaagcagtggaattagaacgtgttttacatcgtaatcttatttatttagccacaatt
gctgaccgtacagcgacgcagcctgcagtcggaccaacaaattgttcacatccaattcct
tccggtttgactcaacctaatcaaattcaagactctgcaccaaattatccattatctgta
gttaacgcatcatcggatctgtcccagtcgtctgttgttggacaacctcatcaaatttca
gttaattcgtcagttcagcatccagtacctatggcagtcggtcctacaacaatatctact
gttgggaatcctattatgtatcagcagtatcttgtttcctctgcttctcatgttccaaat
aatctacaagttacatcacaaaatcatatgggaataagtggttctagtcagtttcaacaa
cacgaacgtgtagtgcaacattctggtggacaaattgcatctgtcgaatcgagtggtacc
gtttcacccaattcgatcgcaatggtttcttcataa
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