KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5051
Entry
SHJG_5051         CDS       T02063                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:shy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shy03021]
    SHJG_5051
Transcription machinery [BR:shy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SHJG_5051
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 GerE HTH_Crp_2 MarR_2 MarR HTH_3 DUF134 HTH_5 HTH_37
Other DBs
NCBI-ProteinID: AEY90319
LinkDB
Position
5789415..5790146
AA seq 243 aa
MLFAELKDLTPGTPEHNRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAI
DRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTLYGR
SPSTAEIAERLRISEDEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVE
HRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANR
IDA
NT seq 732 nt   +upstreamnt  +downstreamnt
gtgctgttcgccgaactgaaggacctcacccccggcacgccggagcacaaccgggtgcgg
ggagcgctgatcgaggcgaacctcccgctcgtacgctacgccgccgcccgcttccgctcc
cgcaacgagcccatggaggacgtcgtccaggtcggcaccatcgggctgatcaacgccatc
gaccgcttcgaccccgaccggggcgtgcagttccccaccttcgcgatgcccaccgtggtc
ggcgagatcaagcggtacttccgggacaacgtccgcacggtccacgtcccgcgccggctg
cacgagctgtgggtgcaggtcaacagcgccaccgaggacctgaccacgctctacggccgc
tcgccgtccaccgccgagatcgccgagcggctgcggatcagcgaggacgaggtgctgagc
tgcatcgaggcgggacgctcgtaccacgccacctcgctggaggccgcccaggagggcgac
gggctgcccggactgctcgaccggatcggctacgaggacccggccctggacggcgtggaa
caccgcgatctggtccgccacctcctcgtccagctccccgagagagaacagcgcatcctc
ctcctgcgctactacagcaatctcacccagtcacagatcagcgcggaactcggcgtctcc
cagatgcatgtctcgcgcctgctcgcccgtagcttccagcggctgcgttccgcaaatcgg
atcgacgcataa

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