Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5192
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Entry
SHJG_5192 CDS
T02063
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03030
DNA replication
shy03430
Mismatch repair
shy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHJG_5192
03430 Mismatch repair
SHJG_5192
03440 Homologous recombination
SHJG_5192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shy03032
]
SHJG_5192
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_5192
Enzymes [BR:
shy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHJG_5192
DNA replication proteins [BR:
shy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHJG_5192
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHJG_5192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
AEY90460
LinkDB
All DBs
Position
5947444..5948574
Genome browser
AA seq
376 aa
AA seq
DB search
MKIRVERDVLAEAVAWAARSLPARPPAPVLAGLLLKAEDGQLSLSSFDYEVSARVNVEAE
VEEEGTVLVSGRLLADISRALPNRPVEISTDGVRVTVTCGSSRFTLHTLPVEEYPSLPQM
PNATGTVPGEVFAAAVSQVAIAAGRDDTLPVLTGVRIEIEGDTVTLASTDRYRFAVREFL
WKPENPDASAVALVPAKTLLDTAKALGAGDSVTLALSGSGAGEGLIGFEGAGRRTTTRLL
EGDLPKYRTLFPTEFNSIAVIETAPFVEAVKRVALVAERNTPVRLSFEQGVLILEAGSSD
DAQAVERVDAQLDGDDISIAFNPTFLLDGLSAIDSPVAQLSFTTSTKPALLSGKPAVDAE
ADEAYKYLIMPVRLSG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatccgggtggaacgcgacgtactcgcggaggcagtggcgtgggccgcacgcagc
ctcccggcccgtccgccggcgcctgtcctcgccggcctgctgctgaaggccgaggacggc
cagctcagcctgtccagcttcgactacgaggtctccgcgcgggtgaacgtcgaggcggag
gtcgaggaggagggcaccgtcctcgtctccggccggctgctcgccgacatctcccgcgcc
ctgcccaaccggccggtggagatttccacagacggtgtacgggtcaccgtgacgtgcggc
tcctcccggttcaccctccacaccctgcccgtggaggagtacccctcgctgccgcagatg
ccgaacgcgaccggcaccgtccccggtgaggtcttcgccgccgccgtctcccaggtggcc
atcgcggccggccgggacgacacgctcccggtgctcaccggtgtgcgcatcgagatcgag
ggcgacacggtcaccctggcctccaccgaccgctaccgcttcgcggtccgcgagttcctg
tggaagccggagaaccccgacgcgtccgcggtcgccctggtcccggcgaagacgctgctg
gacaccgcgaaggcgctgggcgccggggacagcgtcacgctggcgctgtccgggtccggc
gccggtgagggcctgatcggtttcgagggcgccgggcggcgtacgaccacgcgtctgctc
gaaggcgacctgccgaagtaccgcacgctgttcccgaccgagttcaactccatcgccgtg
atcgagaccgcgccgttcgtggaggccgtcaagcgcgtggcgctggtcgccgagcggaac
accccggtgcggctcagcttcgagcagggtgtgctgatcctggaggccgggtcgagcgac
gacgcacaggctgtggaaagggtggacgcccagctggacggcgatgacatctccatcgcc
ttcaacccgacgttcctgctggacggtctgagcgcgatcgactcgccggtggcgcagctg
tcgttcaccacgtccacgaagccggcgctgctgagcggcaagccggcggtggacgcggag
gccgacgaggcctacaagtacctgatcatgccggtgcggctcagcggctga
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